ENSG00000183570


Homo sapiens

Features
Gene ID: ENSG00000183570
  
Biological name :PCBP3
  
Synonyms : P57721 / PCBP3 / poly(rC) binding protein 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 21
Strand: 1
Band: q22.3
Gene start: 45643694
Gene end: 45942454
  
Corresponding Affymetrix probe sets: 205663_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000383168
Ensembl peptide - ENSP00000448986
Ensembl peptide - ENSP00000401198
Ensembl peptide - ENSP00000383159
Ensembl peptide - ENSP00000383160
Ensembl peptide - ENSP00000383163
Ensembl peptide - ENSP00000383164
Ensembl peptide - ENSP00000383165
NCBI entrez gene - 54039     See in Manteia.
OMIM - 608502
RefSeq - NM_001130141
RefSeq - NM_001348244
RefSeq - NM_020528
RefSeq Peptide - NP_001123613
RefSeq Peptide - NP_065389
RefSeq Peptide - NP_001335173
swissprot - P57721
swissprot - J3QT27
swissprot - E9PFP8
Ensembl - ENSG00000183570
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcbp3ENSDARG00000054378Danio rerio
 PCBP3ENSGALG00000004394Gallus gallus
 Pcbp3ENSMUSG00000001120Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PCBP2 / Q15366 / poly(rC) binding protein 2ENSG0000019711171
PCBP1 / Q15365 / poly(rC) binding protein 1ENSG0000016956464
PCBP4 / P57723 / poly(rC) binding protein 4ENSG0000009009753
HNRNPK / P61978 / heterogeneous nuclear ribonucleoprotein KENSG0000016511931
NOVA1 / P51513 / NOVA alternative splicing regulator 1ENSG0000013991028
NOVA2 / Q9UNW9 / NOVA alternative splicing regulator 2ENSG0000010496727


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR036612  K Homology domain, type 1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0016071 mRNA metabolic process NAS
 cellular_componentGO:0005634 nucleus HDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol HDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003690 double-stranded DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:1990829 C-rich single-stranded DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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