ENSG00000090097


Homo sapiens

Features
Gene ID: ENSG00000090097
  
Biological name :PCBP4
  
Synonyms : P57723 / PCBP4 / poly(rC) binding protein 4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p21.2
Gene start: 51957454
Gene end: 51974016
  
Corresponding Affymetrix probe sets: 209361_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000417196
Ensembl peptide - ENSP00000417100
Ensembl peptide - ENSP00000417916
Ensembl peptide - ENSP00000420008
Ensembl peptide - ENSP00000419694
Ensembl peptide - ENSP00000419672
Ensembl peptide - ENSP00000419557
Ensembl peptide - ENSP00000418997
Ensembl peptide - ENSP00000418925
Ensembl peptide - ENSP00000418613
Ensembl peptide - ENSP00000418312
Ensembl peptide - ENSP00000322341
Ensembl peptide - ENSP00000348111
Ensembl peptide - ENSP00000395030
NCBI entrez gene - 57060     See in Manteia.
OMIM - 608503
RefSeq - XM_017006920
RefSeq - NM_001174100
RefSeq - NM_020418
RefSeq - NM_033008
RefSeq - NM_033010
RefSeq - XM_005265330
RefSeq - XM_005265331
RefSeq - XM_005265332
RefSeq - XM_006713268
RefSeq - XM_006713269
RefSeq - XM_006713270
RefSeq - XM_006713271
RefSeq - XM_017006916
RefSeq - XM_017006917
RefSeq - XM_017006918
RefSeq - XM_017006919
RefSeq Peptide - NP_127501
RefSeq Peptide - NP_127503
RefSeq Peptide - NP_001167571
RefSeq Peptide - NP_065151
swissprot - C9J7A9
swissprot - C9J5V4
swissprot - C9J0A4
swissprot - C9K0A2
swissprot - F8WC71
swissprot - P57723
swissprot - A0A024R320
swissprot - C9IZV9
swissprot - C9JZY3
swissprot - C9JTY5
swissprot - C9JSA6
Ensembl - ENSG00000090097
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcbp4ENSDARG00000024276Danio rerio
 PCBP4ENSGALG00000027695Gallus gallus
 Pcbp4ENSMUSG00000023495Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PCBP3 / P57721 / poly(rC) binding protein 3ENSG0000018357049
PCBP2 / Q15366 / poly(rC) binding protein 2ENSG0000019711148
PCBP1 / Q15365 / poly(rC) binding protein 1ENSG0000016956446
NOVA2 / Q9UNW9 / NOVA alternative splicing regulator 2ENSG0000010496724
HNRNPK / P61978 / heterogeneous nuclear ribonucleoprotein KENSG0000016511924
NOVA1 / P51513 / NOVA alternative splicing regulator 1ENSG0000013991023


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR015946  K homology domain-like, alpha/beta
 IPR033088  Poly(rC)-binding protein 4
 IPR036612  K Homology domain, type 1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest TAS
 biological_processGO:0043488 regulation of mRNA stability IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding NAS
 molecular_functionGO:0003730 mRNA 3"-UTR binding IDA


Pathways (from Reactome)
Pathway description
TP53 Regulates Transcription of Genes Involved in G1 Cell Cycle Arrest
Transcriptional activation of cell cycle inhibitor p21


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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