ENSGALG00000005435


Gallus gallus

Features
Gene ID: ENSGALG00000005435
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : Pkd1l2
  
Species: Gallus gallus
  
Chr. number: 11
Strand: -1
Band:
Gene start: 15636273
Gene end: 15670143
  
Corresponding Affymetrix probe sets: GgaAffx.9226.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051757
Ensembl peptide - ENSGALP00000008713
Ensembl peptide - ENSGALP00000045741
Ensembl peptide - ENSGALP00000048364
Ensembl peptide - ENSGALP00000050788
swissprot - A0A1D5NZC3
swissprot - A0A1D5P6N7
swissprot - A0A1D5PDE3
swissprot - A0A1D5PG37
swissprot - E1C6F6
Ensembl - ENSGALG00000005435
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pkd1l2aENSDARG00000105344Danio rerio
 pkd1l2bENSDARG00000088121Danio rerio
 pkd1l2bENSDARG00000101214Danio rerio
 Pkd1l2ENSMUSG00000034416Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PKD1 / polycystin 1, transient receptor potential channel interacting / O08852* / P98161* / Polycystin-1 *ENSGALG0000000571418
PKD2 / polycystin-2 / O35245* / Q13563* / polycystin 2, transient receptor potential cation channel*ENSGALG000000109217
PKD2L1 / polycystin 2 like 1, transient receptor potential cation channel / A2A259* / Q9P0L9* / Polycystic kidney disease 2-like 1 protein *ENSGALG000000057667
PKD2L2 / polycystin 2 like 2, transient receptor potential cation channel / Q9JLG4* / Q9NZM6* / Polycystic kidney disease 2-like 2 protein *ENSGALG000000061205
PKDREJ* / Q9NTG1* / polycystin family receptor for egg jelly*ENSGALG000000391332


Protein motifs (from Interpro)
Interpro ID Name
 IPR000203  GPS motif
 IPR000601  PKD domain
 IPR000922  D-galactoside/L-rhamnose binding SUEL lectin domain
 IPR001024  PLAT/LH2 domain
 IPR001304  C-type lectin-like
 IPR002859  PKD/REJ-like domain
 IPR003915  Polycystic kidney disease type 2 protein
 IPR013122  Polycystin cation channel, PKD1/PKD2
 IPR014010  REJ domain
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050982 detection of mechanical stimulus IBA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 biological_processGO:0098869 cellular oxidant detoxification IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004096 catalase activity IEA
 molecular_functionGO:0005262 calcium channel activity IBA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0020037 heme binding IEA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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