ENSGALG00000005766


Gallus gallus

Features
Gene ID: ENSGALG00000005766
  
Biological name :PKD2L1
  
Synonyms : PKD2L1 / polycystin 2 like 1, transient receptor potential cation channel
  
Possible biological names infered from orthology : A2A259 / Polycystic kidney disease 2-like 1 protein / Q9P0L9
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 17521316
Gene end: 17535317
  
Corresponding Affymetrix probe sets: GgaAffx.3613.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009247
Ensembl peptide - ENSGALP00000046333
NCBI entrez gene - 428954     See in Manteia.
RefSeq - XM_426509
swissprot - A0A1D5P103
swissprot - F1N8N3
Ensembl - ENSGALG00000005766
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pkd2l1ENSDARG00000022503Danio rerio
 PKD2L1ENSG00000107593Homo sapiens
 A2A259ENSMUSG00000037578Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PKD2 / polycystin-2 / O35245* / Q13563* / polycystin 2, transient receptor potential cation channel*ENSGALG0000001092150
PKD2L2 / polycystin 2 like 2, transient receptor potential cation channel / Q9JLG4* / Q9NZM6* / Polycystic kidney disease 2-like 2 protein *ENSGALG0000000612027
Pkd1l2*ENSGALG0000000543521
PKD1 / polycystin 1, transient receptor potential channel interacting / O08852* / P98161* / Polycystin-1 *ENSGALG0000000571418
PKDREJ* / Q9NTG1* / polycystin family receptor for egg jelly*ENSGALG000000391331


Protein motifs (from Interpro)
Interpro ID Name
 IPR003915  Polycystic kidney disease type 2 protein
 IPR011992  EF-hand domain pair
 IPR013122  Polycystin cation channel, PKD1/PKD2
 IPR027359  Voltage-dependent channel domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001581 detection of chemical stimulus involved in sensory perception of sour taste IEA
 biological_processGO:0006812 cation transport IEA
 biological_processGO:0007224 smoothened signaling pathway IEA
 biological_processGO:0035725 sodium ion transmembrane transport IEA
 biological_processGO:0050915 sensory perception of sour taste IEA
 biological_processGO:0050982 detection of mechanical stimulus IBA
 biological_processGO:0070207 protein homotrimerization IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 biological_processGO:0071468 cellular response to acidic pH IEA
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0034703 cation channel complex IEA
 cellular_componentGO:0034704 calcium channel complex IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0043235 receptor complex IEA
 cellular_componentGO:0097730 non-motile cilium IEA
 molecular_functionGO:0005227 calcium activated cation channel activity IEA
 molecular_functionGO:0005261 cation channel activity IEA
 molecular_functionGO:0005262 calcium channel activity IEA
 molecular_functionGO:0005272 sodium channel activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0008092 cytoskeletal protein binding IEA
 molecular_functionGO:0008324 cation transmembrane transporter activity IEA
 molecular_functionGO:0015269 calcium-activated potassium channel activity IEA
 molecular_functionGO:0033040 sour taste receptor activity IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0051371 muscle alpha-actinin binding IEA
 molecular_functionGO:0051393 alpha-actinin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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