ENSGALG00000005767


Gallus gallus

Features
Gene ID: ENSGALG00000005767
  
Biological name :TRAF7
  
Synonyms : TNF receptor associated factor 7 / TRAF7
  
Possible biological names infered from orthology : Q6Q0C0
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 6455145
Gene end: 6483759
  
Corresponding Affymetrix probe sets: Gga.2892.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009249
Ensembl peptide - ENSGALP00000063547
Ensembl peptide - ENSGALP00000060305
Ensembl peptide - ENSGALP00000050524
NCBI entrez gene - 416555     See in Manteia.
RefSeq - XM_015294206
RefSeq - NM_001012528
RefSeq - XM_015294204
RefSeq - XM_015294205
RefSeq Peptide - NP_001012546
swissprot - A0A1L1RXH7
swissprot - A0A1L1RNE3
swissprot - A0A1D5PCN5
swissprot - F1NEH1
Ensembl - ENSGALG00000005767
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 traf7ENSDARG00000060207Danio rerio
 TRAF7ENSG00000131653Homo sapiens
 Traf7ENSMUSG00000052752Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BTRC / beta-transducin repeat containing E3 ubiquitin protein ligase / Q3ULA2* / Q9Y297* / F-box/WD repeat-containing protein 1A *ENSGALG0000000782018
ZNF106 / zinc finger protein 106 / Q9H2Y7* / Zfp106*ENSGALG0000000908118
FBXW7 / F-box and WD repeat domain containing 7 / Q8VBV4* / Q969H0* / F-box/WD repeat-containing protein 7 *ENSGALG0000001010317
FBXW11 / F-box and WD repeat domain containing 11 / Q5SRY7* / Q9UKB1* / F-box/WD repeat-containing protein 11 *ENSGALG0000000222916
ENSGALG0000001733616
WDR86 / WD repeat domain 86 / Q86TI4*ENSGALG0000001969012
FBXW2 / F-box and WD repeat domain containing 2 / Q9UKT8*ENSGALG0000000086411
CDRT1* / Q5XX13* / FBXW10* / O95170* / Q5SUS0* / CMT1A duplicated region transcript 1* / F-box/WD repeat-containing protein 10 * / F-box and WD repeat domain containing 10*ENSGALG0000004456711


Protein motifs (from Interpro)
Interpro ID Name
 IPR001293  Zinc finger, TRAF-type
 IPR001680  WD40 repeat
 IPR001841  Zinc finger, RING-type
 IPR008974  TRAF-like
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000185 activation of MAPKKK activity IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0043410 positive regulation of MAPK cascade IEA
 biological_processGO:2001235 positive regulation of apoptotic signaling pathway IEA
 cellular_componentGO:0000151 ubiquitin ligase complex IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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