ENSGALG00000006835


Gallus gallus

Features
Gene ID: ENSGALG00000006835
  
Biological name :TNNC2
  
Synonyms : P02588 / TNNC2 / Troponin C, skeletal muscle
  
Possible biological names infered from orthology : P02585 / P20801 / troponin C2, fast skeletal type
  
Species: Gallus gallus
  
Chr. number: 20
Strand: -1
Band:
Gene start: 10712017
Gene end: 10713814
  
Corresponding Affymetrix probe sets: Gga.823.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011046
NCBI entrez gene - 396434     See in Manteia.
RefSeq - NM_205450
RefSeq Peptide - NP_990781
swissprot - P02588
Ensembl - ENSGALG00000006835
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:rp71-17i16.4ENSDARG00000095002Danio rerio
 tnnc2ENSDARG00000070835Danio rerio
 TNNC2ENSG00000101470Homo sapiens
 Tnnc2ENSMUSG00000017300Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TNNC1 / P09860 / Troponin C, slow skeletal and cardiac muscles / P63316* / P19123* / troponin C1, slow skeletal and cardiac type*ENSGALG0000000145967
CALML3 / calmodulin like 3 / P27482* / Q9D6P8* / Calmodulin-like protein 3 *ENSGALG0000000842448
CALM1 / P62149 / Calmodulin / CALM2* / P0DP24* / calmodulin 2*ENSGALG0000002644547
CALM2 / P62149 / Calmodulin / Calm3* / CALM1* / P0DP23* / P0DP26* / P0DP27* / P0DP28* / calmodulin 1*ENSGALG0000001002347
CABP2 / calcium-binding protein 2 / Q9NPB3*ENSGALG0000003749735
CABP1 / calcium binding protein 1 / Q9JLK7* / Q9NZU7*ENSGALG0000000711633
CALML4 / calmodulin like 4 / Q91WQ9* / Q96GE6* / Calmodulin-like protein 4 *ENSGALG0000000797930


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003009 skeletal muscle contraction IEA
 biological_processGO:0006937 regulation of muscle contraction IBA
 cellular_componentGO:0005861 troponin complex IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0048306 calcium-dependent protein binding IBA
 molecular_functionGO:0051015 actin filament binding IBA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000006572 TNNT3 / P12620 / Troponin T, fast skeletal muscle isoforms / P45378* / troponin T3, skeletal, fast* / troponin T3, fast skeletal type*  / complex






 

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