ENSDARG00000095002


Danio rerio

Features
Gene ID: ENSDARG00000095002
  
Biological name :si:rp71-17i16.4
  
Synonyms : si:rp71-17i16.4
  
Possible biological names infered from orthology : P02585 / P20801 / TNNC2 / troponin C2, fast skeletal type / Troponin C, skeletal muscle
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 20408227
Gene end: 20420243
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000116801
NCBI entrez gene - 100002038     See in Manteia.
swissprot - E9QFE7
ZFIN ID - ZDB-GENE-090312-215
Ensembl - ENSDARG00000095002
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TNNC2ENSGALG00000006835Gallus gallus
 TNNC2ENSG00000101470Homo sapiens
 Tnnc2ENSMUSG00000017300Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tnnc2 / troponin C type 2 (fast) / P20801* / P02585* / Troponin C, skeletal muscle * / troponin C2, fast skeletal type*ENSDARG0000007083579
tnnc1a / troponin C type 1a (slow)ENSDARG0000001140060
tnnc1b / troponin C type 1b (slow) / TNNC1* / P63316* / P19123* / troponin C1, slow skeletal and cardiac type* / Troponin C, slow skeletal and cardiac muscles *ENSDARG0000003753960
calm2a / calm2b / calm1a / calm3a / Q6PI52 / calmodulin 1aENSDARG0000002181147
calm2a / calm2b / calm3a / Q6PI52 / calmodulin 2a (phosphorylase kinase, delta)ENSDARG0000010082547
calm2b / calm3a / calm2a / calm3b / Q6PI52 / calmodulin 2a (phosphorylase kinase, delta)ENSDARG0000007405747
calm2a / calm2b / calm3a / Q6PI52 / calmodulin 2b, (phosphorylase kinase, delta)ENSDARG0000003142747
calm1b / calm2a / calm2b / Q6PI52 / calm3a / calmodulin 1b / Calm3* / CALM1* / P0DP27* / P0DP28* / P0DP26* / P0DP23* / calmodulin 1*ENSDARG0000003418747
calm2a / calm2b / calm3a / Q6PI52 / calmodulin 3a (phosphorylase kinase, delta)ENSDARG0000001505044
cabp2a / calcium binding protein 2a / CABP2* / Q9NPB3* / calcium binding protein 2*ENSDARG0000005201637
cabp5a / calcium binding protein 5a / CABP5* / Q9JLK3* / Q9NP86* / calcium binding protein 5*ENSDARG0000000257635
cabp2b / calcium binding protein 2b / CABP2* / Q9NPB3* / calcium binding protein 2*ENSDARG0000005227734
cabp5b / calcium binding protein 5b / CABP5* / Q9JLK3* / Q9NP86* / calcium binding protein 5*ENSDARG0000002848534
cabp1a / calcium binding protein 1a / CABP1* / Q9JLK7* / Q9NZU7* / calcium binding protein 1*ENSDARG0000001999033
cabp4 / calcium binding protein 4 / P57796* / Q8VHC5*ENSDARG0000000886632
calml4a / calmodulin-like 4a / CALML4* / Q91WQ9* / Q96GE6* / calmodulin like 4* / Calmodulin-like protein 4 *ENSDARG0000007580032
cabp1b / calcium binding protein 1b / CABP1* / Q9JLK7* / Q9NZU7* / calcium binding protein 1*ENSDARG0000003341132
si:cabz01076231.1 / CABP4* / P57796* / Q8VHC5* / calcium binding protein 4*ENSDARG0000010563130
calml4b / calmodulin-like 4bENSDARG0000005934727


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000037954 tnnt1 / troponin T type 1 (skeletal, slow) / P13805* / O88346* / troponin T1, skeletal, slow* / troponin T1, slow skeletal type*  / complex
 ENSDARG00000052708 tnni1b / troponin I type 1b (skeletal, slow) / TNNI1* / P19237* / troponin I1, slow skeletal type*  / complex






 

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