ENSDARG00000028485


Danio rerio

Features
Gene ID: ENSDARG00000028485
  
Biological name :cabp5b
  
Synonyms : cabp5b / calcium binding protein 5b
  
Possible biological names infered from orthology : CABP5 / calcium binding protein 5 / Q9JLK3 / Q9NP86
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 15296824
Gene end: 15317392
  
Corresponding Affymetrix probe sets: Dr.23234.1.A1_at (Zebrafish Array)   NM_001020732_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000043800
NCBI entrez gene - 553766     See in Manteia.
RefSeq - NM_001020732
RefSeq Peptide - NP_001018568
swissprot - Q504A7
ZFIN ID - ZDB-GENE-050522-146
Ensembl - ENSDARG00000028485
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABP5ENSG00000105507Homo sapiens
 Cabp5ENSMUSG00000005649Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cabp5a / calcium binding protein 5a / CABP5* / Q9JLK3* / Q9NP86* / calcium binding protein 5*ENSDARG0000000257682
cabp2a / calcium binding protein 2a / CABP2* / Q9NPB3* / calcium binding protein 2*ENSDARG0000005201669
cabp1b / calcium binding protein 1b / CABP1* / Q9JLK7* / Q9NZU7* / calcium binding protein 1*ENSDARG0000003341166
cabp1a / calcium binding protein 1a / CABP1* / Q9JLK7* / Q9NZU7* / calcium binding protein 1*ENSDARG0000001999066
cabp2b / calcium binding protein 2b / CABP2* / Q9NPB3* / calcium binding protein 2*ENSDARG0000005227763
cabp4 / calcium binding protein 4 / P57796* / Q8VHC5*ENSDARG0000000886653
si:cabz01076231.1 / CABP4* / P57796* / Q8VHC5* / calcium binding protein 4*ENSDARG0000010563150
calm2b / calm3a / calm2a / calm3b / Q6PI52 / calmodulin 2a (phosphorylase kinase, delta)ENSDARG0000007405737
calm2a / calm2b / calm1a / calm3a / Q6PI52 / calmodulin 1aENSDARG0000002181137
calm2a / calm2b / calm3a / Q6PI52 / calmodulin 2a (phosphorylase kinase, delta)ENSDARG0000010082537
calm2a / calm2b / calm3a / Q6PI52 / calmodulin 2b, (phosphorylase kinase, delta)ENSDARG0000003142737
calm1b / calm2a / calm2b / Q6PI52 / calm3a / calmodulin 1b / Calm3* / CALM1* / P0DP27* / P0DP28* / P0DP26* / P0DP23* / calmodulin 1*ENSDARG0000003418737
calm2a / calm2b / calm3a / Q6PI52 / calmodulin 3a (phosphorylase kinase, delta)ENSDARG0000001505034
tnnc1a / troponin C type 1a (slow)ENSDARG0000001140033
tnnc2 / troponin C type 2 (fast) / P20801* / P02585* / Troponin C, skeletal muscle * / troponin C2, fast skeletal type*ENSDARG0000007083533
tnnc1b / troponin C type 1b (slow) / TNNC1* / P63316* / P19123* / troponin C1, slow skeletal and cardiac type* / Troponin C, slow skeletal and cardiac muscles *ENSDARG0000003753933
si:rp71-17i16.4 / TNNC2* / P20801* / P02585* / Troponin C, skeletal muscle * / troponin C2, fast skeletal type*ENSDARG0000009500232
calml4a / calmodulin-like 4a / CALML4* / Q91WQ9* / Q96GE6* / calmodulin like 4* / Calmodulin-like protein 4 *ENSDARG0000007580028
calml4b / calmodulin-like 4bENSDARG0000005934722


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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