ENSDARG00000019990


Danio rerio

Features
Gene ID: ENSDARG00000019990
  
Biological name :cabp1a
  
Synonyms : cabp1a / calcium binding protein 1a
  
Possible biological names infered from orthology : CABP1 / calcium binding protein 1 / Q9JLK7 / Q9NZU7
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 39890186
Gene end: 39952727
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000016102
Ensembl peptide - ENSDARP00000145577
NCBI entrez gene - 449789     See in Manteia.
RefSeq - NM_001328365
RefSeq - NM_001005962
RefSeq Peptide - NP_001005962
RefSeq Peptide - NP_001315294
swissprot - Q5XJJ6
ZFIN ID - ZDB-GENE-041010-36
Ensembl - ENSDARG00000019990
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABP1ENSGALG00000007116Gallus gallus
 CABP1ENSG00000157782Homo sapiens
 Cabp1ENSMUSG00000029544Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cabp1b / calcium binding protein 1b / CABP1* / Q9JLK7* / Q9NZU7* / calcium binding protein 1*ENSDARG0000003341176
cabp2a / calcium binding protein 2a / CABP2* / Q9NPB3* / calcium binding protein 2*ENSDARG0000005201666
cabp2b / calcium binding protein 2b / CABP2* / Q9NPB3* / calcium binding protein 2*ENSDARG0000005227763
cabp5b / calcium binding protein 5b / CABP5* / Q9JLK3* / Q9NP86* / calcium binding protein 5*ENSDARG0000002848560
cabp5a / calcium binding protein 5a / CABP5* / Q9JLK3* / Q9NP86* / calcium binding protein 5*ENSDARG0000000257660
cabp4 / calcium binding protein 4 / P57796* / Q8VHC5*ENSDARG0000000886652
si:cabz01076231.1 / CABP4* / P57796* / Q8VHC5* / calcium binding protein 4*ENSDARG0000010563149
calm2a / calm2b / calm3a / Q6PI52 / calmodulin 2a (phosphorylase kinase, delta)ENSDARG0000010082531
calm2a / calm2b / calm3a / Q6PI52 / calmodulin 2b, (phosphorylase kinase, delta)ENSDARG0000003142731
calm2a / calm2b / calm1a / calm3a / Q6PI52 / calmodulin 1aENSDARG0000002181131
calm1b / calm2a / calm2b / Q6PI52 / calm3a / calmodulin 1b / Calm3* / CALM1* / P0DP27* / P0DP28* / P0DP26* / P0DP23* / calmodulin 1*ENSDARG0000003418731
calm2b / calm3a / calm2a / calm3b / Q6PI52 / calmodulin 2a (phosphorylase kinase, delta)ENSDARG0000007405731
tnnc1b / troponin C type 1b (slow) / TNNC1* / P63316* / P19123* / troponin C1, slow skeletal and cardiac type* / Troponin C, slow skeletal and cardiac muscles *ENSDARG0000003753930
tnnc1a / troponin C type 1a (slow)ENSDARG0000001140030
tnnc2 / troponin C type 2 (fast) / P20801* / P02585* / Troponin C, skeletal muscle * / troponin C2, fast skeletal type*ENSDARG0000007083529
calm2a / calm2b / calm3a / Q6PI52 / calmodulin 3a (phosphorylase kinase, delta)ENSDARG0000001505029
si:rp71-17i16.4 / TNNC2* / P20801* / P02585* / Troponin C, skeletal muscle * / troponin C2, fast skeletal type*ENSDARG0000009500228
calml4a / calmodulin-like 4a / CALML4* / Q91WQ9* / Q96GE6* / calmodulin like 4* / Calmodulin-like protein 4 *ENSDARG0000007580024
calml4b / calmodulin-like 4bENSDARG0000005934719


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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