ENSMUSG00000029544


Mus musculus

Features
Gene ID: ENSMUSG00000029544
  
Biological name :Cabp1
  
Synonyms : Cabp1 / Calcium-binding protein 1 / Q9JLK7
  
Possible biological names infered from orthology : Q9NZU7
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: F
Gene start: 115168689
Gene end: 115194381
  
Corresponding Affymetrix probe sets: 10532956 (MoGene1.0st)   1421255_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000031519
Ensembl peptide - ENSMUSP00000107740
Ensembl peptide - ENSMUSP00000107741
Ensembl peptide - ENSMUSP00000138183
NCBI entrez gene - 29867     See in Manteia.
MGI - MGI:1352750
RefSeq - NM_001310712
RefSeq - NM_001310715
RefSeq - NM_013879
RefSeq Peptide - NP_001297641
RefSeq Peptide - NP_001297644
RefSeq Peptide - NP_038907
swissprot - Q9JLK7
swissprot - D3Z1M4
swissprot - Q812F6
Ensembl - ENSMUSG00000029544
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cabp1aENSDARG00000019990Danio rerio
 cabp1bENSDARG00000033411Danio rerio
 CABP1ENSGALG00000007116Gallus gallus
 CABP1ENSG00000157782Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cabp2 / calcium binding protein 2 / Q9NPB3*ENSMUSG0000002485736
Cabp5 / Q9JLK3 / Calcium-binding protein 5 / Q9NP86*ENSMUSG0000000564931
Cabp4 / Q8VHC5 / Calcium-binding protein 4 / P57796*ENSMUSG0000002484229
Calm1 / P0DP28 / P0DP26 / P0DP27 / Calmodulin-1 / P0DP23*ENSMUSG0000000117518
Calm3 / P0DP27 / P0DP28 / P0DP26 / Calmodulin-1 / CALM1* / P0DP23*ENSMUSG0000001937018
Calml3 / Q9D6P8 / Calmodulin-like protein 3 / P27482* / calmodulin like 3*ENSMUSG0000006313018
Calm2 / P0DP27 / P0DP28 / P0DP26 / Calmodulin-1 / CALM3* / P0DP25* / calmodulin 3*ENSMUSG0000003643818
Tnnc1 / P19123 / Troponin C, slow skeletal and cardiac muscles / P63316* / troponin C1, slow skeletal and cardiac type*ENSMUSG0000009189816
Tnnc2 / P20801 / Troponin C, skeletal muscle / P02585* / troponin C2, fast skeletal type*ENSMUSG0000001730016
Calm4 / Q9JM83 / Calmodulin-4 / Q9NZT1* / CALML5* / calmodulin like 5*ENSMUSG0000003376514
Calml4 / Q91WQ9 / Calmodulin-like protein 4 / Q96GE6* / calmodulin like 4*ENSMUSG0000003224612
Calm5 / calmodulin 5 / CALML5* / Q9NZT1* / calmodulin like 5*ENSMUSG0000009926911


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042308 negative regulation of protein import into nucleus ISS
 cellular_componentGO:0000139 Golgi membrane ISO
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0014069 postsynaptic density IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008139 nuclear localization sequence binding ISS
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0048306 calcium-dependent protein binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001510 abnormal coat appearance "coat that looks different from the usual state " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: C1qtnf5tm1.1(KOMP)Vlcg/C1qtnf5tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-C1qtnf5tm1.1(KOMP)Vlcg/Ucd

 MP:0005551 abnormal eye electrophysiology "abnormal function of the eye as determined through electrophysiological recordings from single cells or summary recordings from multiple cells (e.g. electroretinogram)" [NMF:Stephanie Pretel, Neuroscience Mutagenesis Facility Curator]
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Allelic Composition: Fbxw7tm1Iken/Fbxw7tm1Iken,Krastm4Tyj/Kras+,Speer6-ps1Tg(Alb-cre)21Mgn/Speer6-ps1+
Genetic Background: involves: 129S4/SvJae * C57BL/6 * C57BL/6N * DBA

 MP:0013278 decreased fasted circulating glucose level "reduction in the amount of glucose in the blood at some defined time point after eating compared to controls" [MGI:Armida_Di_Fenza]
Show

Allelic Composition: Cbx5tm1a(EUCOMM)Wtsi/Cbx5tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Cbx5tm1a(EUCOMM)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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