ENSMUSG00000024857


Mus musculus

Features
Gene ID: ENSMUSG00000024857
  
Biological name :Cabp2
  
Synonyms : Cabp2 / calcium binding protein 2
  
Possible biological names infered from orthology : Q9NPB3
  
Species: Mus musculus
  
Chr. number: 19
Strand: 1
Band: A
Gene start: 4081578
Gene end: 4087340
  
Corresponding Affymetrix probe sets: 10460303 (MoGene1.0st)   1420597_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000124389
Ensembl peptide - ENSMUSP00000124607
Ensembl peptide - ENSMUSP00000125255
Ensembl peptide - ENSMUSP00000125740
NCBI entrez gene - 29866     See in Manteia.
MGI - MGI:1352749
RefSeq - XM_006531770
RefSeq - NM_013878
RefSeq - XM_006531763
RefSeq - XM_006531764
RefSeq - XM_006531765
RefSeq - XM_006531766
RefSeq - XM_006531767
RefSeq - XM_006531769
RefSeq - NM_001160252
RefSeq - NM_001160253
RefSeq Peptide - NP_001153725
RefSeq Peptide - NP_038906
RefSeq Peptide - NP_001153724
swissprot - G3XA29
swissprot - E0CXZ2
swissprot - G5E8W3
swissprot - G3XA16
Ensembl - ENSMUSG00000024857
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cabp2aENSDARG00000052016Danio rerio
 cabp2bENSDARG00000052277Danio rerio
 CABP2ENSGALG00000037497Gallus gallus
 CABP2ENSG00000167791Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cabp1 / Q9JLK7 / Calcium-binding protein 1 / Q9NZU7*ENSMUSG0000002954457
Cabp4 / Q8VHC5 / Calcium-binding protein 4 / P57796*ENSMUSG0000002484250
Cabp5 / Q9JLK3 / Calcium-binding protein 5 / Q9NP86*ENSMUSG0000000564949
Calm1 / P0DP28 / P0DP26 / P0DP27 / Calmodulin-1 / P0DP23*ENSMUSG0000000117530
Calml3 / Q9D6P8 / Calmodulin-like protein 3 / P27482* / calmodulin like 3*ENSMUSG0000006313030
Calm3 / P0DP27 / P0DP28 / P0DP26 / Calmodulin-1 / CALM1* / P0DP23*ENSMUSG0000001937029
Calm2 / P0DP27 / P0DP28 / P0DP26 / Calmodulin-1 / CALM3* / P0DP25* / calmodulin 3*ENSMUSG0000003643829
Tnnc2 / P20801 / Troponin C, skeletal muscle / P02585* / troponin C2, fast skeletal type*ENSMUSG0000001730026
Tnnc1 / P19123 / Troponin C, slow skeletal and cardiac muscles / P63316* / troponin C1, slow skeletal and cardiac type*ENSMUSG0000009189824
Calm4 / Q9JM83 / Calmodulin-4 / Q9NZT1* / CALML5* / calmodulin like 5*ENSMUSG0000003376524
Calm5 / calmodulin 5 / CALML5* / Q9NZT1* / calmodulin like 5*ENSMUSG0000009926919
Calml4 / Q91WQ9 / Calmodulin-like protein 4 / Q96GE6* / calmodulin like 4*ENSMUSG0000003224618


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR015754  Calcium binding protein 2
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0004433 abnormal cochlear inner hair cell physiology "anomalies in processes pertinent to the function of cochlear IHCs which constitute the true sensory cell type sending impulses via the cochlear (auditory) nerve" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Olfr151tm42(Mc4r)Mom/Olfr151tm42(Mc4r)Mom
Genetic Background: B6;129P2-Olfr151tm42(Mc4r)Mom/MomJ

 MP:0005551 abnormal eye electrophysiology "abnormal function of the eye as determined through electrophysiological recordings from single cells or summary recordings from multiple cells (e.g. electroretinogram)" [NMF:Stephanie Pretel, Neuroscience Mutagenesis Facility Curator]
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Allelic Composition: Fbxw7tm1Iken/Fbxw7tm1Iken,Krastm4Tyj/Kras+,Speer6-ps1Tg(Alb-cre)21Mgn/Speer6-ps1+
Genetic Background: involves: 129S4/SvJae * C57BL/6 * C57BL/6N * DBA

 MP:0006335 abnormal hearing electrophysiology "anomaly in auditory function as it relates to electrical phenomena" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Olfr151tm42(Mc4r)Mom/Olfr151tm42(Mc4r)Mom
Genetic Background: B6;129P2-Olfr151tm42(Mc4r)Mom/MomJ

 MP:0011966 abnormal auditory brainstem response waveform shape "any anomaly in the characteristic pattern of electrical activity recording of a series of vertex positive waves generated by neurons in the ascending auditory system, that can be recorded from scalp electrograms by using computer-averaged responses to short tone bursts" [MGI:csmith]
Show

Allelic Composition: Olfr151tm42(Mc4r)Mom/Olfr151tm42(Mc4r)Mom
Genetic Background: B6;129P2-Olfr151tm42(Mc4r)Mom/MomJ

 MP:0011967 increased or absent threshold for auditory brainstem response "increase in the value at which one or more sound frequencies or broadband clicks first elicits a recordable response generated by electrical activity of neurons in the ascending auditory system, or complete lack of a recordable response at any frequency or broadband click" [MGI:csmith]
Show

Allelic Composition: Olfr151tm42(Mc4r)Mom/Olfr151tm42(Mc4r)Mom
Genetic Background: B6;129P2-Olfr151tm42(Mc4r)Mom/MomJ

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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