ENSDARG00000031427


Danio rerio

Features
Gene ID: ENSDARG00000031427
  
Biological name :calm2b
  
Synonyms : calm2a / calm2b / calm3a / calmodulin 2b, (phosphorylase kinase, delta) / Q6PI52
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 8777633
Gene end: 8785610
  
Corresponding Affymetrix probe sets: Dr.6963.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000010393
NCBI entrez gene - 192322     See in Manteia.
NCBI entrez gene - 336121     See in Manteia.
swissprot - Q6PI52
swissprot - B2GQW3
ZFIN ID - ZDB-GENE-020415-2
ZFIN ID - ZDB-GENE-030131-5590
ZFIN ID - ZDB-GENE-030804-3
Ensembl - ENSDARG00000031427
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
calm2a / calm2b / calm1a / calm3a / Q6PI52 / calmodulin 1aENSDARG00000021811100
calm2a / calm2b / calm3a / Q6PI52 / calmodulin 2a (phosphorylase kinase, delta)ENSDARG00000100825100
calm2b / calm3a / calm2a / calm3b / Q6PI52 / calmodulin 2a (phosphorylase kinase, delta)ENSDARG00000074057100
calm1b / calm2a / calm2b / Q6PI52 / calm3a / calmodulin 1b / Calm3* / CALM1* / P0DP27* / P0DP28* / P0DP26* / P0DP23* / calmodulin 1*ENSDARG00000034187100
calm2a / calm2b / calm3a / Q6PI52 / calmodulin 3a (phosphorylase kinase, delta)ENSDARG0000001505094
tnnc1b / troponin C type 1b (slow) / TNNC1* / P63316* / P19123* / troponin C1, slow skeletal and cardiac type* / Troponin C, slow skeletal and cardiac muscles *ENSDARG0000003753952
tnnc2 / troponin C type 2 (fast) / P20801* / P02585* / Troponin C, skeletal muscle * / troponin C2, fast skeletal type*ENSDARG0000007083552
tnnc1a / troponin C type 1a (slow)ENSDARG0000001140052
calml4a / calmodulin-like 4a / CALML4* / Q91WQ9* / Q96GE6* / calmodulin like 4* / Calmodulin-like protein 4 *ENSDARG0000007580051
si:rp71-17i16.4 / TNNC2* / P20801* / P02585* / Troponin C, skeletal muscle * / troponin C2, fast skeletal type*ENSDARG0000009500250
cabp2a / calcium binding protein 2a / CABP2* / Q9NPB3* / calcium binding protein 2*ENSDARG0000005201646
cabp5b / calcium binding protein 5b / CABP5* / Q9JLK3* / Q9NP86* / calcium binding protein 5*ENSDARG0000002848542
cabp5a / calcium binding protein 5a / CABP5* / Q9JLK3* / Q9NP86* / calcium binding protein 5*ENSDARG0000000257642
si:cabz01076231.1 / CABP4* / P57796* / Q8VHC5* / calcium binding protein 4*ENSDARG0000010563140
cabp1b / calcium binding protein 1b / CABP1* / Q9JLK7* / Q9NZU7* / calcium binding protein 1*ENSDARG0000003341140
calml4b / calmodulin-like 4bENSDARG0000005934740
cabp1a / calcium binding protein 1a / CABP1* / Q9JLK7* / Q9NZU7* / calcium binding protein 1*ENSDARG0000001999039
cabp2b / calcium binding protein 2b / CABP2* / Q9NPB3* / calcium binding protein 2*ENSDARG0000005227739
cabp4 / calcium binding protein 4 / P57796* / Q8VHC5*ENSDARG0000000886638


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr