ENSGALG00000007541


Gallus gallus

Features
Gene ID: ENSGALG00000007541
  
Biological name :STX16
  
Synonyms : STX16
  
Possible biological names infered from orthology : O14662 / Q8BVI5 / STX16-NPEPL1 / STX16-NPEPL1 readthrough (NMD candidate) / syntaxin 16
  
Species: Gallus gallus
  
Chr. number: 20
Strand: -1
Band:
Gene start: 11276215
Gene end: 11286725
  
Corresponding Affymetrix probe sets: GgaAffx.12300.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055294
Ensembl peptide - ENSGALP00000012180
NCBI entrez gene - 419315     See in Manteia.
RefSeq - XM_015296406
RefSeq - NM_001006295
RefSeq - XM_015296405
RefSeq Peptide - NP_001006295
swissprot - Q5ZK87
swissprot - A0A1D5PQX3
Ensembl - ENSGALG00000007541
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stx16ENSDARG00000003307Danio rerio
 STX16ENSG00000124222Homo sapiens
 STX16-NPEPL1ENSG00000254995Homo sapiens
 Stx16ENSMUSG00000027522Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR006011  Syntaxin, N-terminal domain
 IPR006012  Syntaxin/epimorphin, conserved site
 IPR010989  SNARE
 IPR028673  Syntaxin-16


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048278 vesicle docking IBA
 biological_processGO:0061025 membrane fusion IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031201 SNARE complex IEA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IEA


Pathways (from Reactome)
Pathway description
Intra-Golgi traffic
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001055 NSF / P46459* / P46460* / Vesicle-fusing ATPase * / N-ethylmaleimide sensitive factor, vesicle fusing ATPase*  / complex / reaction
 ENSGALG00000003880 STX6 / Q5ZL19 / Syntaxin-6 / O43752* / Q9JKK1*  / complex
 ENSGALG00000008880 VTI1A / vesicle transport through interaction with t-SNAREs 1A / O89116* / Q96AJ9*  / complex
 ENSGALG00000000579 VAMP3 / vesicle associated membrane protein 3 / P63024* / Q15836*  / complex
 ENSGALG00000031381 VAMP4 / vesicle associated membrane protein 4 / O70480* / O75379*  / complex






 

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