ENSG00000124222


Homo sapiens

Features
Gene ID: ENSG00000124222
  
Biological name :STX16
  
Synonyms : O14662 / STX16 / syntaxin 16
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: q13.32
Gene start: 58651253
Gene end: 58679526
  
Corresponding Affymetrix probe sets: 1558249_s_at (Human Genome U133 Plus 2.0 Array)   221499_s_at (Human Genome U133 Plus 2.0 Array)   221500_s_at (Human Genome U133 Plus 2.0 Array)   221638_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000416852
Ensembl peptide - ENSP00000432414
Ensembl peptide - ENSP00000437209
Ensembl peptide - ENSP00000436667
Ensembl peptide - ENSP00000435118
Ensembl peptide - ENSP00000434369
Ensembl peptide - ENSP00000432823
Ensembl peptide - ENSP00000312086
Ensembl peptide - ENSP00000348229
Ensembl peptide - ENSP00000350723
Ensembl peptide - ENSP00000352634
Ensembl peptide - ENSP00000354445
Ensembl peptide - ENSP00000360173
Ensembl peptide - ENSP00000360183
Ensembl peptide - ENSP00000388348
Ensembl peptide - ENSP00000401801
NCBI entrez gene - 8675     See in Manteia.
OMIM - 603666
RefSeq - NM_001204868
RefSeq - NM_003763
RefSeq - NM_001001433
RefSeq - NM_001134772
RefSeq - NM_001134773
RefSeq Peptide - NP_001191797
RefSeq Peptide - NP_003754
RefSeq Peptide - NP_001001433
RefSeq Peptide - NP_001128244
RefSeq Peptide - NP_001128245
swissprot - Q96NX8
swissprot - E9PLV7
swissprot - B7ZBM8
swissprot - B7ZBM5
swissprot - B7ZBM4
swissprot - F8W9Z6
swissprot - H0YEW0
swissprot - O14662
swissprot - E9PND6
Ensembl - ENSG00000124222
  
Related genetic diseases (OMIM): 603233 - Pseudohypoparathyroidism, type IB, 603233
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stx16ENSDARG00000003307Danio rerio
 STX16ENSGALG00000007541Gallus gallus
 Stx16ENSMUSG00000027522Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
STX16-NPEPL1 / STX16-NPEPL1 readthrough (NMD candidate)ENSG0000025499590


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR006011  Syntaxin, N-terminal domain
 IPR006012  Syntaxin/epimorphin, conserved site
 IPR010989  SNARE
 IPR028673  Syntaxin-16


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IMP
 biological_processGO:0048278 vesicle docking IBA
 biological_processGO:0090161 Golgi ribbon formation IMP
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005802 trans-Golgi network IDA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005925 focal adhesion HDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0031201 SNARE complex IDA
 cellular_componentGO:0031985 Golgi cisterna IDA
 cellular_componentGO:0032588 trans-Golgi network membrane TAS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 molecular_functionGO:0005484 SNAP receptor activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019905 syntaxin binding IPI


Pathways (from Reactome)
Pathway description
Intra-Golgi traffic
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000293 Full cheeks 
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 HP:0000311 Round face "An unusually round appearance of the face." [HPO:curators]
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 HP:0000470 Short neck 
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 HP:0000509 Conjunctivitis "Inflammation of the conjunctiva." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000684 Delayed dentition "Delayed eruption of teeth." [HPO:curators]
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0000737 Irritability 
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 HP:0000739 Anxiety 
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 HP:0000824 Growth hormone deficiency "Insufficient production of growth hormone, which is produced by the anterior pituitary gland." [HPO:curators]
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 HP:0000852 Pseudohypoparathyroidism 
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 HP:0001156 Brachydactyly 
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 HP:0001265 Hyporeflexia 
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0001657 Prolonged QT interval on EKG 
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 HP:0002094 Dyspnea 
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 HP:0002199 Seizures due to hypocalcemia 
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 HP:0002901 Hypocalcemia "A level of blood calcium that is lower than normal." [HPO:curators]
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 HP:0002905 Hyperphosphatemia 
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 HP:0003034 Diaphyseal sclerosis 
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 HP:0003165 Elevated serum parathyroid hormone (PTH) level 
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 HP:0003394 Muscle cramps 
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 HP:0003401 Paresthesia "Abnormal sensations such as tingling, pricking, or numbness of the skin with no apparent physical cause." [HPO:curators]
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 HP:0003456 Low urinary cyclic AMP response to PTH administration 
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 HP:0003472 Hypocalcemic tetany 
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 HP:0003739 Myoclonic spasms 
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 HP:0003745 Sporadic 
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 HP:0003909 Cortical subperiosteal resorption (humeral metaphyses) 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005700 Increased bone density with cystic changes 
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 HP:0006297 Hypoplastic dental enamel 
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 HP:0008227 Pituitary resistance to thyroid hormone "A condition in which the pituitary gland is partially resistant to thyroid hormone, so that it continues to secrete thyroid-stimulating hormone (TSH) until the blood level of thyroid hormone rises higher than normal." [HPO:curators]
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 HP:0010049 Hypoplastic/short metacarpal bones 
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 HP:0011458 Abdominal symptom 
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 HP:0012049 Laryngeal dystonia "A form of focal dystonia that affects the vocal cords, associated with involuntary contractions of the vocal cords causing interruptions of speech and affecting the voice quality and often leading to patterned, repeated breaks in speech." [HPO:probinson]
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 HP:0100660 Dyskinesis "A movement disorder which consists of effects including diminished voluntary movements and the presence of involuntary movements." [HPO:sdoelken]
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 HP:0100749 Chest pain 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000104915 STX10 / O60499 / syntaxin 10  / complex
 ENSG00000105402 NAPA / P54920 / NSF attachment protein alpha  / reaction / complex
 ENSG00000135823 STX6 / O43752 / syntaxin 6  / complex
 ENSG00000135968 GCC2 / Q8IWJ2 / GRIP and coiled-coil domain containing 2  / reaction
 ENSG00000117533 VAMP4 / O75379 / vesicle associated membrane protein 4  / complex
 ENSG00000049245 VAMP3 / Q15836 / vesicle associated membrane protein 3  / complex / reaction
 ENSG00000003056 M6PR / P20645 / mannose-6-phosphate receptor, cation dependent  / reaction
 ENSG00000073969 NSF / P46459 / N-ethylmaleimide sensitive factor, vesicle fusing ATPase  / complex / reaction
 ENSG00000149823 VPS51 / Q9UID3 / VPS51, GARP complex subunit  / reaction
 ENSG00000123595 RAB9A / P51151 / RAB9A, member RAS oncogene family  / reaction
 ENSG00000197081 IGF2R / P11717 / insulin like growth factor 2 receptor  / reaction
 ENSG00000136933 Q7Z6M1 / RABEPK / Rab9 effector protein with kelch motifs  / reaction
 ENSG00000143952 VPS54 / Q9P1Q0 / VPS54, GARP complex subunit  / reaction
 ENSG00000141252 VPS53 / Q5VIR6 / VPS53, GARP complex subunit  / reaction
 ENSG00000223501 VPS52 / Q8N1B4 / VPS52, GARP complex subunit  / reaction
 ENSG00000151532 VTI1A / Q96AJ9 / vesicle transport through interaction with t-SNAREs 1A  / complex






 

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