ENSGALG00000008297


Gallus gallus

Features
Gene ID: ENSGALG00000008297
  
Biological name :SEMA4B
  
Synonyms : SEMA4B / semaphorin 4B
  
Possible biological names infered from orthology : Q62179
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 20062321
Gene end: 20073649
  
Corresponding Affymetrix probe sets: Gga.13042.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013496
NCBI entrez gene - 415582     See in Manteia.
RefSeq - XM_004943956
RefSeq - XM_015292184
RefSeq - XM_413950
swissprot - F1NZV0
Ensembl - ENSGALG00000008297
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sema4baENSDARG00000074414Danio rerio
 sema4bbENSDARG00000076104Danio rerio
 SEMA4BENSG00000185033Homo sapiens
 Q62179ENSMUSG00000030539Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SEMA4G / semaphorin 4G / Q9NTN9* / Q9WUH7*ENSGALG0000002695734
SEMA4D / semaphorin-4D precursor / O09126* / Q92854* / semaphorin 4D*ENSGALG0000001069733
ENSGALG0000000305830
SEMA3G / semaphorin 3G / Q4LFA9* / Q9NS98*ENSGALG0000000447626
SEMA3B / semaphorin 3B / Q13214* / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B*ENSGALG0000001372226
SEMA3A / semaphorin-3A / O08665* / Q14563*ENSGALG0000000656026
Q90663 / SEMA3D / Semaphorin-3D / O95025* / Q8BH34*ENSGALG0000000656325
SEMA3C / semaphorin-3C precursor / Q62181* / Q99985* / semaphorin 3C*ENSGALG0000004044425
SEMA3E / semaphorin-3E precursor / P70275* / O15041* / semaphorin 3E* / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E*ENSGALG0000003822524
SEMA3F / semaphorin-3F precursor / O88632* / Q13275* / semaphorin 3F*ENSGALG0000002962123


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR002165  Plexin repeat
 IPR007110  Immunoglobulin-like domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR027231  Semaphorin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050919 negative chemotaxis IBA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045202 synapse IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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