ENSGALG00000029621


Gallus gallus

Features
Gene ID: ENSGALG00000029621
  
Biological name :SEMA3F
  
Synonyms : SEMA3F / semaphorin-3F precursor
  
Possible biological names infered from orthology : O88632 / Q13275 / semaphorin 3F
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 3167398
Gene end: 3189955
  
Corresponding Affymetrix probe sets: Gga.14.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045106
Ensembl peptide - ENSGALP00000055334
Ensembl peptide - ENSGALP00000048526
NCBI entrez gene - 374109     See in Manteia.
RefSeq - NM_204258
RefSeq Peptide - NP_989589
swissprot - A0A1D5PR13
swissprot - A0A1D5NXK9
Ensembl - ENSGALG00000029621
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sema3faENSDARG00000011163Danio rerio
 sema3fbENSDARG00000055373Danio rerio
 Q13275ENSG00000001617Homo sapiens
 O88632ENSMUSG00000034684Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SEMA3C / semaphorin-3C precursor / Q62181* / Q99985* / semaphorin 3C*ENSGALG0000004044447
SEMA3A / semaphorin-3A / O08665* / Q14563*ENSGALG0000000656042
SEMA3B / semaphorin 3B / Q13214* / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B*ENSGALG0000001372242
SEMA3G / semaphorin 3G / Q4LFA9* / Q9NS98*ENSGALG0000000447639
Q90663 / SEMA3D / Semaphorin-3D / O95025* / Q8BH34*ENSGALG0000000656339
SEMA3E / semaphorin-3E precursor / P70275* / O15041* / semaphorin 3E* / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E*ENSGALG0000003822538
SEMA4G / semaphorin 4G / Q9NTN9* / Q9WUH7*ENSGALG0000002695727
SEMA4D / semaphorin-4D precursor / O09126* / Q92854* / semaphorin 4D*ENSGALG0000001069725
ENSGALG0000000305825
SEMA4B / semaphorin 4B / Q62179*ENSGALG0000000829724


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013151  Immunoglobulin
 IPR013783  Immunoglobulin-like fold
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR027231  Semaphorin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001755 neural crest cell migration IEA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0021612 facial nerve structural organization IEA
 biological_processGO:0021637 trigeminal nerve structural organization IEA
 biological_processGO:0021675 nerve development IEA
 biological_processGO:0021785 branchiomotor neuron axon guidance IEA
 biological_processGO:0036486 ventral trunk neural crest cell migration IEA
 biological_processGO:0048843 negative regulation of axon extension involved in axon guidance IEA
 biological_processGO:0048846 axon extension involved in axon guidance IEA
 biological_processGO:0050919 negative chemotaxis IEA
 biological_processGO:0061549 sympathetic ganglion development IEA
 biological_processGO:0097490 sympathetic neuron projection extension IEA
 biological_processGO:0097491 sympathetic neuron projection guidance IEA
 biological_processGO:1901166 neural crest cell migration involved in autonomic nervous system development IEA
 biological_processGO:1902285 semaphorin-plexin signaling pathway involved in neuron projection guidance IEA
 biological_processGO:1902287 semaphorin-plexin signaling pathway involved in axon guidance IEA
 cellular_componentGO:0005615 extracellular space IEA
 molecular_functionGO:0045499 chemorepellent activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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