ENSGALG00000013722


Gallus gallus

Features
Gene ID: ENSGALG00000013722
  
Biological name :SEMA3B
  
Synonyms : SEMA3B / semaphorin 3B
  
Possible biological names infered from orthology : Q13214 / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 3221466
Gene end: 3225875
  
Corresponding Affymetrix probe sets: Gga.17533.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000035090
Ensembl peptide - ENSGALP00000056063
Ensembl peptide - ENSGALP00000055739
Ensembl peptide - ENSGALP00000045191
NCBI entrez gene - 426234     See in Manteia.
RefSeq - XM_015293489
RefSeq - XM_015293490
RefSeq - XM_015293491
swissprot - A0A1D5PT22
swissprot - H9L2E3
swissprot - A0A1D5PS59
swissprot - A0A1D5NXU1
Ensembl - ENSGALG00000013722
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sema3bENSDARG00000011672Danio rerio
 Q13214ENSG00000012171Homo sapiens
 Sema3bENSMUSG00000057969Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SEMA3A / semaphorin-3A / O08665* / Q14563*ENSGALG0000000656046
SEMA3F / semaphorin-3F precursor / O88632* / Q13275* / semaphorin 3F*ENSGALG0000002962140
SEMA3G / semaphorin 3G / Q4LFA9* / Q9NS98*ENSGALG0000000447639
Q90663 / SEMA3D / Semaphorin-3D / O95025* / Q8BH34*ENSGALG0000000656339
SEMA3C / semaphorin-3C precursor / Q62181* / Q99985* / semaphorin 3C*ENSGALG0000004044439
SEMA3E / semaphorin-3E precursor / P70275* / O15041* / semaphorin 3E* / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E*ENSGALG0000003822537
SEMA4G / semaphorin 4G / Q9NTN9* / Q9WUH7*ENSGALG0000002695727
ENSGALG0000000305827
SEMA4D / semaphorin-4D precursor / O09126* / Q92854* / semaphorin 4D*ENSGALG0000001069726
SEMA4B / semaphorin 4B / Q62179*ENSGALG0000000829726


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR027231  Semaphorin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050919 negative chemotaxis IBA
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0038191 neuropilin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr