ENSG00000012171


Homo sapiens

Features
Gene ID: ENSG00000012171
  
Biological name :SEMA3B
  
Synonyms : Q13214 / SEMA3B / semaphorin 3B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p21.31
Gene start: 50267558
Gene end: 50277546
  
Corresponding Affymetrix probe sets: 203070_at (Human Genome U133 Plus 2.0 Array)   203071_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000484146
Ensembl peptide - ENSP00000482586
Ensembl peptide - ENSP00000485173
Ensembl peptide - ENSP00000485646
Ensembl peptide - ENSP00000485281
Ensembl peptide - ENSP00000480680
Ensembl peptide - ENSP00000481957
NCBI entrez gene - 7869     See in Manteia.
OMIM - 601281
RefSeq - NM_001005914
RefSeq - NM_001290060
RefSeq - NM_001290061
RefSeq - NM_001290062
RefSeq - NM_001290063
RefSeq - NM_004636
RefSeq Peptide - NP_001276992
RefSeq Peptide - NP_004627
RefSeq Peptide - NP_001005914
RefSeq Peptide - NP_001276989
RefSeq Peptide - NP_001276990
RefSeq Peptide - NP_001276991
swissprot - Q13214
swissprot - A0A0C4DGV8
swissprot - A0A087WZE0
swissprot - B4DEK9
Ensembl - ENSG00000012171
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sema3bENSDARG00000011672Danio rerio
 SEMA3BENSGALG00000013722Gallus gallus
 Sema3bENSMUSG00000057969Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q14563 / SEMA3A / semaphorin 3AENSG0000007521353
Q9NS98 / SEMA3G / semaphorin 3GENSG0000001031947
Q13275 / SEMA3F / semaphorin 3FENSG0000000161747
O15041 / SEMA3E / semaphorin 3EENSG0000017038145
O95025 / SEMA3D / semaphorin 3DENSG0000015399345
Q99985 / SEMA3C / semaphorin 3CENSG0000007522344
Q9C0C4 / SEMA4C / semaphorin 4CENSG0000016875831
Q9NTN9 / SEMA4G / semaphorin 4GENSG0000009553931
Q92854 / SEMA4D / semaphorin 4DENSG0000018776430
SEMA4B / semaphorin 4BENSG0000018503330
Q9H3S1 / SEMA4A / semaphorin 4AENSG0000019618928
O95754 / SEMA4F / ssemaphorin 4FENSG0000013562228


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013151  Immunoglobulin
 IPR013783  Immunoglobulin-like fold
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR027231  Semaphorin
 IPR036179  Immunoglobulin-like domain superfamily
 IPR036352  Sema domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007267 cell-cell signaling TAS
 biological_processGO:0007411 axon guidance TAS
 biological_processGO:0050919 negative chemotaxis IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0005783 endoplasmic reticulum TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0038191 neuropilin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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