ENSGALG00000040444


Gallus gallus

Features
Gene ID: ENSGALG00000040444
  
Biological name :SEMA3C
  
Synonyms : SEMA3C / semaphorin-3C precursor
  
Possible biological names infered from orthology : Q62181 / Q99985 / semaphorin 3C
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 11044256
Gene end: 11159489
  
Corresponding Affymetrix probe sets: Gga.1846.1.S1_at (Chicken Array)   Gga.1846.1.S2_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058277
NCBI entrez gene - 374090     See in Manteia.
RefSeq - NM_204243
RefSeq - XM_015300792
RefSeq Peptide - NP_989574
swissprot - A0A1D5PZ68
Ensembl - ENSGALG00000040444
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sema3cENSDARG00000034300Danio rerio
 Q99985ENSG00000075223Homo sapiens
 Q62181ENSMUSG00000028780Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SEMA3F / semaphorin-3F precursor / O88632* / Q13275* / semaphorin 3F*ENSGALG0000002962150
SEMA3A / semaphorin-3A / O08665* / Q14563*ENSGALG0000000656047
Q90663 / SEMA3D / Semaphorin-3D / O95025* / Q8BH34*ENSGALG0000000656347
SEMA3B / semaphorin 3B / Q13214* / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B*ENSGALG0000001372244
SEMA3G / semaphorin 3G / Q4LFA9* / Q9NS98*ENSGALG0000000447643
SEMA3E / semaphorin-3E precursor / P70275* / O15041* / semaphorin 3E* / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E*ENSGALG0000003822542
SEMA4D / semaphorin-4D precursor / O09126* / Q92854* / semaphorin 4D*ENSGALG0000001069729
SEMA4G / semaphorin 4G / Q9NTN9* / Q9WUH7*ENSGALG0000002695728
SEMA4B / semaphorin 4B / Q62179*ENSGALG0000000829727
ENSGALG0000000305827


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR027231  Semaphorin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001755 neural crest cell migration IEA
 biological_processGO:0001756 somitogenesis IEA
 biological_processGO:0001974 blood vessel remodeling IEA
 biological_processGO:0003148 outflow tract septum morphogenesis IEA
 biological_processGO:0003151 outflow tract morphogenesis IEA
 biological_processGO:0003215 cardiac right ventricle morphogenesis IEA
 biological_processGO:0003350 pulmonary myocardium development IEA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0009791 post-embryonic development IEA
 biological_processGO:0021915 neural tube development IEA
 biological_processGO:0060174 limb bud formation IEA
 biological_processGO:0060666 dichotomous subdivision of terminal units involved in salivary gland branching IEA
 biological_processGO:0071526 semaphorin-plexin signaling pathway IEA
 biological_processGO:0140074 cardiac endothelial to mesenchymal transition IEA
 biological_processGO:1905312 positive regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis IEA
 cellular_componentGO:0005615 extracellular space IEA
 molecular_functionGO:0030215 semaphorin receptor binding IEA
 molecular_functionGO:0038191 neuropilin binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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