ENSGALG00000009705


Gallus gallus

Features
Gene ID: ENSGALG00000009705
  
Biological name :RYR3
  
Synonyms : ryanodine receptor 3 / RYR3
  
Possible biological names infered from orthology : A2AGL3 / Q15413
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 30176326
Gene end: 30360664
  
Corresponding Affymetrix probe sets: Gga.11284.1.S1_at (Chicken Array)   Gga.658.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050499
Ensembl peptide - ENSGALP00000060582
Ensembl peptide - ENSGALP00000050885
Ensembl peptide - ENSGALP00000005342
NCBI entrez gene - 396111     See in Manteia.
RefSeq - XM_015287303
RefSeq - XM_015287298
RefSeq - XM_015287299
RefSeq - XM_015287300
RefSeq - XM_015287301
RefSeq - XM_015287302
RefSeq - NM_206874
RefSeq - XM_015287292
RefSeq - XM_015287293
RefSeq - XM_015287294
RefSeq - XM_015287295
RefSeq - XM_015287296
RefSeq - XM_015287297
RefSeq Peptide - NP_996757
swissprot - A0A1L1RP70
swissprot - A0A1D5PDP0
swissprot - F1NSR9
swissprot - A0A1D5PCL0
Ensembl - ENSGALG00000009705
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ryr3ENSDARG00000071331Danio rerio
 RYR3ENSG00000198838Homo sapiens
 Ryr3ENSMUSG00000057378Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RYR2 / ryanodine receptor 2 / E9Q401* / Q92736* / ryanodine receptor 2, cardiac*ENSGALG0000001081269
ITPR3 / inositol 1,4,5-trisphosphate receptor type 3 / P70227* / Q14573*ENSGALG0000000314913
ITPR1 / inositol 1,4,5-trisphosphate receptor type 1 / P11881* / Q14643*ENSGALG0000000829413
ENSGALG0000001407111
ENSGALG000000433011


Protein motifs (from Interpro)
Interpro ID Name
 IPR000699  RIH domain
 IPR001870  B30.2/SPRY domain
 IPR002048  EF-hand domain
 IPR003032  Ryanodine receptor Ryr
 IPR003877  SPRY domain
 IPR005821  Ion transport domain
 IPR009460  Ryanodine Receptor TM 4-6
 IPR011992  EF-hand domain pair
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013333  Ryanodine receptor
 IPR013662  RyR/IP3R Homology associated domain
 IPR014821  Inositol 1,4,5-trisphosphate/ryanodine receptor
 IPR015925  Ryanodine receptor-related
 IPR016024  Armadillo-type fold
 IPR016093  MIR motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0006874 cellular calcium ion homeostasis IEA
 biological_processGO:0051209 release of sequestered calcium ion into cytosol IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0005623 cell IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005219 ryanodine-sensitive calcium-release channel activity IEA
 molecular_functionGO:0005262 calcium channel activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0015278 calcium-release channel activity IEA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels
Ion homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000009705 RYR3 / ryanodine receptor 3 / A2AGL3* / Q15413*  / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr