ENSGALG00000010186


Gallus gallus

Features
Gene ID: ENSGALG00000010186
  
Biological name :CAPN11
  
Synonyms : Calpain-1 catalytic subunit / CAPN11 / P00789
  
Possible biological names infered from orthology : calpain 11 / Q6J756 / Q9UMQ6
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 30406110
Gene end: 30416492
  
Corresponding Affymetrix probe sets: Gga.1707.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052109
Ensembl peptide - ENSGALP00000016538
NCBI entrez gene - 396240     See in Manteia.
RefSeq - XM_015283625
RefSeq - NM_205303
RefSeq Peptide - NP_990634
swissprot - P00789
swissprot - A0A1I7Q411
Ensembl - ENSGALG00000010186
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 capn1aENSDARG00000052702Danio rerio
 capn1bENSDARG00000052748Danio rerio
 CAPN11ENSG00000137225Homo sapiens
 Capn11ENSMUSG00000058626Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CAPN2 / calpain-2 catalytic subunit precursor / O08529* / P17655* / calpain 2* / Calpain-2 catalytic subunit *ENSGALG0000000936063
CAPN3 / calpain 3 / P20807* / Q64691*ENSGALG0000000905054
CAPN14 / calpain 14 / A8MX76*ENSGALG0000000906936
CAPN13 / calpain 13 / Q3UW68* / Q6MZZ7*ENSGALG0000002008434
CAPN8 / calpain 8 / A6NHC0* / Q91VA3*ENSGALG0000000938232
CAPN5 / calpain 5 / O08688* / O15484*ENSGALG0000004047831
CAPN6 / calpain 6 / O35646* / Q9Y6Q1*ENSGALG0000000800631


Protein motifs (from Interpro)
Interpro ID Name
 IPR000169  Cysteine peptidase, cysteine active site
 IPR001300  Peptidase C2, calpain, catalytic domain
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR022682  Peptidase C2, calpain, large subunit, domain III
 IPR022683  Peptidase C2, calpain, domain III
 IPR022684  Peptidase C2, calpain family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 cellular_componentGO:0001669 acrosomal vesicle IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0004198 calcium-dependent cysteine-type endopeptidase activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Degradation of the extracellular matrix


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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