ENSGALG00000040478


Gallus gallus

Features
Gene ID: ENSGALG00000040478
  
Biological name :CAPN5
  
Synonyms : calpain 5 / CAPN5
  
Possible biological names infered from orthology : O08688 / O15484
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 193324498
Gene end: 193358592
  
Corresponding Affymetrix probe sets: Gga.15967.1.S1_at (Chicken Array)   GgaAffx.496.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051548
Ensembl peptide - ENSGALP00000053793
NCBI entrez gene - 419086     See in Manteia.
RefSeq - XM_417278
swissprot - A0A1D5PFI2
swissprot - A0A1D5PLS3
Ensembl - ENSGALG00000040478
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 capn5aENSDARG00000103317Danio rerio
 capn5bENSDARG00000069748Danio rerio
 CAPN5ENSG00000149260Homo sapiens
 Capn5ENSMUSG00000035547Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CAPN6 / calpain 6 / O35646* / Q9Y6Q1*ENSGALG0000000800659
CAPN3 / calpain 3 / P20807* / Q64691*ENSGALG0000000905035
CAPN11 / P00789 / Calpain-1 catalytic subunit / Q6J756* / Q9UMQ6* / calpain 11*ENSGALG0000001018634
CAPN2 / calpain-2 catalytic subunit precursor / O08529* / P17655* / calpain 2* / Calpain-2 catalytic subunit *ENSGALG0000000936033
CAPN14 / calpain 14 / A8MX76*ENSGALG0000000906930
CAPN13 / calpain 13 / Q3UW68* / Q6MZZ7*ENSGALG0000002008429
CAPN8 / calpain 8 / A6NHC0* / Q91VA3*ENSGALG0000000938222


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR000169  Cysteine peptidase, cysteine active site
 IPR001300  Peptidase C2, calpain, catalytic domain
 IPR022682  Peptidase C2, calpain, large subunit, domain III
 IPR022683  Peptidase C2, calpain, domain III
 IPR022684  Peptidase C2, calpain family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0009986 cell surface IEA
 molecular_functionGO:0004198 calcium-dependent cysteine-type endopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Degradation of the extracellular matrix


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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