ENSDARG00000069748


Danio rerio

Features
Gene ID: ENSDARG00000069748
  
Biological name :capn5b
  
Synonyms : calpain 5b / capn5b
  
Possible biological names infered from orthology : calpain 5 / CAPN5 / O08688 / O15484
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 22158744
Gene end: 22214734
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000092508
NCBI entrez gene - 100006332     See in Manteia.
swissprot - E7F7F1
ZFIN ID - ZDB-GENE-091116-29
Ensembl - ENSDARG00000069748
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CAPN5ENSGALG00000040478Gallus gallus
 CAPN5ENSG00000149260Homo sapiens
 Capn5ENSMUSG00000035547Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
capn5a / calpain 5a / CAPN5* / O08688* / O15484* / calpain 5*ENSDARG0000010331778
si:dkey-19b23.13ENSDARG0000006185049
capn3a / calpain 3a, (p94) / CAPN3* / P20807* / calpain 3*ENSDARG0000004186437
capn1a / calpain 1, (mu/I) large subunit a / CAPN11* / Q6J756* / Q9UMQ6* / calpain 11*ENSDARG0000005270236
CAPN1 / si:dkeyp-50d11.2 / O35350* / P07384* / calpain 1* / Calpain-1 catalytic subunit *ENSDARG0000005533836
capn9 / calpain 9 / O14815* / Q9D805*ENSDARG0000001234135
capn8 / calpain 8 / A6NHC0*ENSDARG0000005571535
zgc:55262 / CAPN1* / O35350* / P07384* / calpain 1* / Calpain-1 catalytic subunit *ENSDARG0000004519935
capn2b / calpain 2, (m/II) large subunit b / CAPN2* / P17655* / O08529* / calpain 2* / Calpain-2 catalytic subunit *ENSDARG0000005559234
capn1b / calpain 1, (mu/I) large subunit b / CAPN11* / Q6J756* / Q9UMQ6* / calpain 11*ENSDARG0000005274834
capn2a / calpain 2, (m/II) large subunit a / CAPN2* / P17655* / O08529* / calpain 2* / Calpain-2 catalytic subunit *ENSDARG0000009169934
zgc:92480 / CAPN2* / P17655* / calpain 2*ENSDARG0000003421133
capn3b / calpain 3b / CAPN3* / P20807* / Q64691* / calpain 3*ENSDARG0000004303531
capn12 / calpain 12 / Q6ZSI9*ENSDARG0000001075830
zgc:136872 / A8MX76* / CAPN14* / CAPN13* / Q3UW68* / Q6MZZ7* / calpain 14* / calpain 13*ENSDARG0000000855330
si:ch211-202f3.3 / A8MX76* / CAPN14* / CAPN13* / Q3UW68* / Q6MZZ7* / calpain 14* / calpain 13*ENSDARG0000005291729
zgc:162184 / A8MX76* / CAPN14* / CAPN13* / Q3UW68* / Q6MZZ7* / calpain 14* / calpain 13*ENSDARG0000007721727
si:ch211-202f3.4 / A8MX76* / CAPN14* / CAPN13* / Q3UW68* / Q6MZZ7* / calpain 14* / calpain 13*ENSDARG0000009172327
zgc:85932ENSDARG0000009823927


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR000169  Cysteine peptidase, cysteine active site
 IPR001300  Peptidase C2, calpain, catalytic domain
 IPR022682  Peptidase C2, calpain, large subunit, domain III
 IPR022683  Peptidase C2, calpain, domain III
 IPR022684  Peptidase C2, calpain family
 IPR033883  Calpain subdomain III
 IPR033884  Calpain C2 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004198 calcium-dependent cysteine-type endopeptidase activity IBA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Degradation of the extracellular matrix


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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