ENSDARG00000077217


Danio rerio

Features
Gene ID: ENSDARG00000077217
  
Biological name :zgc:162184
  
Synonyms : zgc:162184
  
Possible biological names infered from orthology : A8MX76 / calpain 13 / calpain 14 / CAPN13 / CAPN14 / Q3UW68 / Q6MZZ7
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 45648836
Gene end: 45678386
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000089722
Ensembl peptide - ENSDARP00000129773
NCBI entrez gene - 559822     See in Manteia.
swissprot - A4QNV6
swissprot - X1WHQ9
ZFIN ID - ZDB-GENE-070424-83
Ensembl - ENSDARG00000077217
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CAPN13ENSGALG00000020084Gallus gallus
 CAPN14ENSGALG00000009069Gallus gallus
 A8MX76ENSG00000214711Homo sapiens
 CAPN13ENSG00000162949Homo sapiens
 Capn13ENSMUSG00000043705Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-202f3.4 / A8MX76* / CAPN14* / CAPN13* / Q3UW68* / Q6MZZ7* / calpain 14* / calpain 13*ENSDARG0000009172356
si:ch211-202f3.3 / A8MX76* / CAPN14* / CAPN13* / Q3UW68* / Q6MZZ7* / calpain 14* / calpain 13*ENSDARG0000005291752
zgc:136872 / A8MX76* / CAPN14* / CAPN13* / Q3UW68* / Q6MZZ7* / calpain 14* / calpain 13*ENSDARG0000000855350
capn8 / calpain 8 / A6NHC0*ENSDARG0000005571540
zgc:92480 / CAPN2* / P17655* / calpain 2*ENSDARG0000003421139
zgc:55262 / CAPN1* / O35350* / P07384* / calpain 1* / Calpain-1 catalytic subunit *ENSDARG0000004519939
capn1b / calpain 1, (mu/I) large subunit b / CAPN11* / Q6J756* / Q9UMQ6* / calpain 11*ENSDARG0000005274839
capn1a / calpain 1, (mu/I) large subunit a / CAPN11* / Q6J756* / Q9UMQ6* / calpain 11*ENSDARG0000005270239
CAPN1 / si:dkeyp-50d11.2 / O35350* / P07384* / calpain 1* / Calpain-1 catalytic subunit *ENSDARG0000005533838
capn2b / calpain 2, (m/II) large subunit b / CAPN2* / P17655* / O08529* / calpain 2* / Calpain-2 catalytic subunit *ENSDARG0000005559238
capn2a / calpain 2, (m/II) large subunit a / CAPN2* / P17655* / O08529* / calpain 2* / Calpain-2 catalytic subunit *ENSDARG0000009169938
capn3a / calpain 3a, (p94) / CAPN3* / P20807* / calpain 3*ENSDARG0000004186437
capn3b / calpain 3b / CAPN3* / P20807* / Q64691* / calpain 3*ENSDARG0000004303536
capn9 / calpain 9 / O14815* / Q9D805*ENSDARG0000001234136
capn12 / calpain 12 / Q6ZSI9*ENSDARG0000001075834
capn5a / calpain 5a / CAPN5* / O08688* / O15484* / calpain 5*ENSDARG0000010331733
si:dkey-19b23.13ENSDARG0000006185033
capn5b / calpain 5b / CAPN5* / O08688* / O15484* / calpain 5*ENSDARG0000006974833
zgc:85932ENSDARG0000009823930


Protein motifs (from Interpro)
Interpro ID Name
 IPR001300  Peptidase C2, calpain, catalytic domain
 IPR022682  Peptidase C2, calpain, large subunit, domain III
 IPR022683  Peptidase C2, calpain, domain III
 IPR022684  Peptidase C2, calpain family
 IPR033883  Calpain subdomain III


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004198 calcium-dependent cysteine-type endopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Degradation of the extracellular matrix


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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