ENSDARG00000091723


Danio rerio

Features
Gene ID: ENSDARG00000091723
  
Biological name :si:ch211-202f3.4
  
Synonyms : si:ch211-202f3.4
  
Possible biological names infered from orthology : A8MX76 / calpain 13 / calpain 14 / CAPN13 / CAPN14 / Q3UW68 / Q6MZZ7
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 45602640
Gene end: 45621301
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000107787
Ensembl peptide - ENSDARP00000128170
NCBI entrez gene - 560088     See in Manteia.
swissprot - E7F0H3
swissprot - X1WD73
ZFIN ID - ZDB-GENE-131120-116
Ensembl - ENSDARG00000091723
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CAPN13ENSGALG00000020084Gallus gallus
 CAPN14ENSGALG00000009069Gallus gallus
 A8MX76ENSG00000214711Homo sapiens
 CAPN13ENSG00000162949Homo sapiens
 Capn13ENSMUSG00000043705Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:162184 / A8MX76* / CAPN14* / CAPN13* / Q3UW68* / Q6MZZ7* / calpain 14* / calpain 13*ENSDARG0000007721756
zgc:136872 / A8MX76* / CAPN14* / CAPN13* / Q3UW68* / Q6MZZ7* / calpain 14* / calpain 13*ENSDARG0000000855351
si:ch211-202f3.3 / A8MX76* / CAPN14* / CAPN13* / Q3UW68* / Q6MZZ7* / calpain 14* / calpain 13*ENSDARG0000005291751
capn8 / calpain 8 / A6NHC0*ENSDARG0000005571538
capn1a / calpain 1, (mu/I) large subunit a / CAPN11* / Q6J756* / Q9UMQ6* / calpain 11*ENSDARG0000005270238
capn3a / calpain 3a, (p94) / CAPN3* / P20807* / calpain 3*ENSDARG0000004186438
capn1b / calpain 1, (mu/I) large subunit b / CAPN11* / Q6J756* / Q9UMQ6* / calpain 11*ENSDARG0000005274837
capn2b / calpain 2, (m/II) large subunit b / CAPN2* / P17655* / O08529* / calpain 2* / Calpain-2 catalytic subunit *ENSDARG0000005559237
zgc:55262 / CAPN1* / O35350* / P07384* / calpain 1* / Calpain-1 catalytic subunit *ENSDARG0000004519937
CAPN1 / si:dkeyp-50d11.2 / O35350* / P07384* / calpain 1* / Calpain-1 catalytic subunit *ENSDARG0000005533837
capn2a / calpain 2, (m/II) large subunit a / CAPN2* / P17655* / O08529* / calpain 2* / Calpain-2 catalytic subunit *ENSDARG0000009169936
capn9 / calpain 9 / O14815* / Q9D805*ENSDARG0000001234135
zgc:92480 / CAPN2* / P17655* / calpain 2*ENSDARG0000003421135
capn3b / calpain 3b / CAPN3* / P20807* / Q64691* / calpain 3*ENSDARG0000004303534
si:dkey-19b23.13ENSDARG0000006185034
capn5b / calpain 5b / CAPN5* / O08688* / O15484* / calpain 5*ENSDARG0000006974833
capn12 / calpain 12 / Q6ZSI9*ENSDARG0000001075832
capn5a / calpain 5a / CAPN5* / O08688* / O15484* / calpain 5*ENSDARG0000010331731
zgc:85932ENSDARG0000009823930


Protein motifs (from Interpro)
Interpro ID Name
 IPR001300  Peptidase C2, calpain, catalytic domain
 IPR022682  Peptidase C2, calpain, large subunit, domain III
 IPR022683  Peptidase C2, calpain, domain III
 IPR022684  Peptidase C2, calpain family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004198 calcium-dependent cysteine-type endopeptidase activity IBA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Degradation of the extracellular matrix


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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