ENSGALG00000012823


Gallus gallus

Features
Gene ID: ENSGALG00000012823
  
Biological name :TRIM24
  
Synonyms : TRIM24 / tripartite motif containing 24
  
Possible biological names infered from orthology : O15164 / Q64127 / Transcription intermediary factor 1-alpha
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 56435003
Gene end: 56493091
  
Corresponding Affymetrix probe sets: GgaAffx.8125.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000062956
Ensembl peptide - ENSGALP00000020886
NCBI entrez gene - 418106     See in Manteia.
RefSeq - XM_015287551
RefSeq - XM_015287546
swissprot - F1P4C7
swissprot - A0A1L1RVU4
Ensembl - ENSGALG00000012823
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 O15164ENSG00000122779Homo sapiens
 Q64127ENSMUSG00000029833Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRIM33 / tripartite motif containing 33 / Q9UPN9*ENSGALG0000000197645
TRIM66 / tripartite motif containing 66 / O15016* / Q924W6*ENSGALG0000000595826
TRIM71 / E3 ubiquitin-protein ligase TRIM71 / Q1PSW8* / Q2Q1W2* / tripartite motif containing 71*ENSGALG0000001962210
TRIM2 / tripartite motif containing 2 / Q9C040* / Q9ESN6*ENSGALG0000000920710
TRIM3 / tripartite motif containing 3 / O75382* / Q9R1R2*ENSGALG000000340049
TRIM45 / tripartite motif containing 45 / Q6PFY8* / Q9H8W5* / Tripartite motif-containing protein 45 *ENSGALG000000148187


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001487  Bromodomain
 IPR001841  Zinc finger, RING-type
 IPR001965  Zinc finger, PHD-type
 IPR003649  B-box, C-terminal
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR018359  Bromodomain, conserved site
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0008285 negative regulation of cell proliferation IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0030163 protein catabolic process IEA
 biological_processGO:0031647 regulation of protein stability IEA
 biological_processGO:0042981 regulation of apoptotic process IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0046777 protein autophosphorylation IEA
 biological_processGO:0055074 calcium ion homeostasis IEA
 biological_processGO:0070562 regulation of vitamin D receptor signaling pathway IEA
 biological_processGO:0071391 cellular response to estrogen stimulus IEA
 biological_processGO:1901796 regulation of signal transduction by p53 class mediator IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005719 nuclear euchromatin IEA
 cellular_componentGO:0005726 perichromatin fibrils IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0002039 p53 binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016922 nuclear receptor binding IEA
 molecular_functionGO:0034056 estrogen response element binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA
 molecular_functionGO:0070577 lysine-acetylated histone binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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