ENSGALG00000001976


Gallus gallus

Features
Gene ID: ENSGALG00000001976
  
Biological name :TRIM33
  
Synonyms : TRIM33 / tripartite motif containing 33
  
Possible biological names infered from orthology : Q9UPN9
  
Species: Gallus gallus
  
Chr. number: 26
Strand: -1
Band:
Gene start: 3846983
Gene end: 3869606
  
Corresponding Affymetrix probe sets: GgaAffx.1308.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003066
NCBI entrez gene - 419883     See in Manteia.
RefSeq - XM_015299017
RefSeq - XM_015299018
RefSeq - XM_015299019
swissprot - F1P5H8
Ensembl - ENSGALG00000001976
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trim33ENSDARG00000016181Danio rerio
 Q9UPN9ENSG00000197323Homo sapiens
 Trim33ENSMUSG00000033014Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRIM24 / tripartite motif containing 24 / O15164* / Q64127* / Transcription intermediary factor 1-alpha *ENSGALG0000001282348
TRIM66 / tripartite motif containing 66 / O15016* / Q924W6*ENSGALG0000000595827
TRIM71 / E3 ubiquitin-protein ligase TRIM71 / Q1PSW8* / Q2Q1W2* / tripartite motif containing 71*ENSGALG0000001962212
TRIM2 / tripartite motif containing 2 / Q9C040* / Q9ESN6*ENSGALG0000000920712
TRIM3 / tripartite motif containing 3 / O75382* / Q9R1R2*ENSGALG0000003400412
TRIM45 / tripartite motif containing 45 / Q6PFY8* / Q9H8W5* / Tripartite motif-containing protein 45 *ENSGALG000000148187


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001487  Bromodomain
 IPR001841  Zinc finger, RING-type
 IPR001965  Zinc finger, PHD-type
 IPR003649  B-box, C-terminal
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0017015 regulation of transforming growth factor beta receptor signaling pathway IEA
 biological_processGO:0030514 negative regulation of BMP signaling pathway IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070410 co-SMAD binding IEA
 molecular_functionGO:0070412 R-SMAD binding IEA


Pathways (from Reactome)
Pathway description
Downregulation of SMAD2/3:SMAD4 transcriptional activity


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000014184 SMAD2* / Q15796* / Q62432* / SMAD family member 2* / Mothers against decapentaplegic homolog 2 *  / reaction / complex
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / reaction
 ENSGALG00000036001 SMAD2Z / SMAD2* / Q62432* / Q15796* / SMAD family member 2* / Mothers against decapentaplegic homolog 2 *  / reaction / complex
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / reaction






 

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