ENSGALG00000015259


Gallus gallus

Features
Gene ID: ENSGALG00000015259
  
Biological name :RB1CC1
  
Synonyms : RB1CC1 / RB1 inducible coiled-coil 1
  
Possible biological names infered from orthology : Q8TDY2 / Q9ESK9 / RB1-inducible coiled-coil protein 1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 110285815
Gene end: 110358845
  
Corresponding Affymetrix probe sets: Gga.1202.1.S1_at (Chicken Array)   GgaAffx.12567.1.S1_s_at (Chicken Array)   GgaAffx.24636.1.S1_s_at (Chicken Array)   GgaAffx.9720.1.A1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000024582
Ensembl peptide - ENSGALP00000055207
NCBI entrez gene - 421116     See in Manteia.
RefSeq - XM_015282659
RefSeq - XM_015282657
RefSeq - XM_015282658
RefSeq - XM_015282654
RefSeq - XM_015282655
RefSeq - XM_015282656
swissprot - E1C330
swissprot - A0A1D5PQP2
Ensembl - ENSGALG00000015259
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rb1cc1ENSDARG00000076559Danio rerio
 Q8TDY2ENSG00000023287Homo sapiens
 Q9ESK9ENSMUSG00000025907Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019460  Autophagy-related protein 11


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IEA
 biological_processGO:0000422 autophagy of mitochondrion IBA
 biological_processGO:0001889 liver development IEA
 biological_processGO:0001934 positive regulation of protein phosphorylation IEA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0030242 autophagy of peroxisome IBA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 biological_processGO:0045793 positive regulation of cell size IEA
 biological_processGO:0046330 positive regulation of JNK cascade IEA
 biological_processGO:0061709 reticulophagy IBA
 biological_processGO:0061723 glycophagy IBA
 biological_processGO:2001237 negative regulation of extrinsic apoptotic signaling pathway IEA
 cellular_componentGO:0000407 phagophore assembly site IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0034045 phagophore assembly site membrane IEA
 cellular_componentGO:1990316 Atg1/ULK1 kinase complex IEA
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0032947 protein-containing complex scaffold activity IBA


Pathways (from Reactome)
Pathway description
Macroautophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001678 PRKAB2 / protein kinase AMP-activated non-catalytic subunit beta 2 / O43741* / Q6PAM0* / protein kinase, AMP-activated, beta 2 non-catalytic subunit*  / reaction / complex
 ENSGALG00000003339 MTOR / mechanistic target of rapamycin kinase / P42345* / Q9JLN9* / Serine/threonine-protein kinase mTOR *  / complex / reaction
 ENSGALG00000005878 MLST8 / MTOR associated protein, LST8 homolog / Q9BVC4* / Q9DCJ1* / Target of rapamycin complex subunit LST8 *  / complex / reaction
 ENSGALG00000007373 PRKAB1 / Q9R078* / Q9Y478* / protein kinase AMP-activated non-catalytic subunit beta 1* / protein kinase, AMP-activated, beta 1 non-catalytic subunit*  / complex / reaction
 ENSGALG00000008347 ATG13 / autophagy related 13 / O75143* / Q91YI1* / Mus musculus autophagy related 13 (Atg13), transcript variant 4, mRNA.*  / complex
 ENSGALG00000014832 PRKAA1 / protein kinase AMP-activated catalytic subunit alpha 1 / Q13131* / Q5EG47* / protein kinase, AMP-activated, alpha 1 catalytic subunit*  / reaction / complex
 ENSGALG00000020999 DYNLL1 / dynein light chain LC8-type 1 / P63168* / P63167* / BC048507* / cDNA sequence BC048507* / Dynein light chain 1, cytoplasmic *  / reaction
 ENSGALG00000041226 RRAGB* / RRAGA* / Q7L523* / Q80X95* / Q5VZM2* / Q6NTA4* / Ras related GTP binding A* / Ras related GTP binding B* / Ras-related GTP-binding protein A * / Ras-related GTP-binding protein B *  / complex / reaction
 ENSGALG00000005522 DYNLL2 / dynein light chain LC8-type 2 / Q96FJ2* / Q9D0M5* / Dynein light chain 2, cytoplasmic *  / reaction
 ENSGALG00000010826 PRKAA2 / protein kinase AMP-activated catalytic subunit alpha 2 / P54646* / Q8BRK8* / protein kinase, AMP-activated, alpha 2 catalytic subunit*  / reaction / complex
 ENSGALG00000026971 RRAGD / Ras related GTP binding D / Q9NQL2*  / complex / reaction
 ENSGALG00000011360 PRKAG3 / 5-AMP-activated protein kinase subunit gamma-3 / Q9UGI9* / Q8BGM7* / protein kinase AMP-activated non-catalytic subunit gamma 3* / protein kinase, AMP-activated, gamma 3 non-catat...  / complex / reaction
 ENSGALG00000035773 PIK3C3 / phosphatidylinositol 3-kinase catalytic subunit type 3 / Q6PF93* / Q8NEB9*  / reaction
 ENSGALG00000014712 SLC38A9 / solute carrier family 38 member 9 / Q8BGD6* / Q8NBW4* / Sodium-coupled neutral amino acid transporter 9 *  / reaction / complex
 ENSGALG00000012148 ATG14 / autophagy related 14 / Q6ZNE5* / Q8CDJ3* / Beclin 1-associated autophagy-related key regulator *  / reaction
 ENSGALG00000036282 O54950* / P54619* / PRKAG1* / protein kinase AMP-activated non-catalytic subunit gamma 1* / protein kinase, AMP-activated, gamma 1 non-catalytic subunit*  / complex / reaction






 

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