ENSGALG00000016579


Gallus gallus

Features
Gene ID: ENSGALG00000016579
  
Biological name :RAB9A
  
Synonyms : RAB9A / RAB9A, member RAS oncogene family
  
Possible biological names infered from orthology : P51151 / Q9R0M6 / Rab9 / RAB9, member RAS oncogene family
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 122970659
Gene end: 122978786
  
Corresponding Affymetrix probe sets: GgaAffx.10612.1.S1_s_at (Chicken Array)   GgaAffx.11502.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026711
NCBI entrez gene - 418635     See in Manteia.
RefSeq - XM_015273561
RefSeq - NM_001008678
RefSeq - XM_015273566
RefSeq Peptide - NP_001008678
swissprot - Q5ZMI5
Ensembl - ENSGALG00000016579
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab9aENSDARG00000045027Danio rerio
 RAB9AENSG00000123595Homo sapiens
 Rab9ENSMUSG00000079316Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAB9B / RAB9B, member RAS oncogene family / Q8BHH2* / Q9NP90*ENSGALG0000000491878
RAB7A / RAB7A, member RAS oncogene family / Rab7* / P51150* / P51149* / RAB7, member RAS oncogene family*ENSGALG0000000590251
RAB7B / RAB7B, member RAS oncogene family / Q8VEA8* / Q96AH8*ENSGALG0000000076942
RAB32 / RAB32, member RAS oncogene family / Q13637* / Q9CZE3*ENSGALG0000001230033
RAB38 / RAB38, member RAS oncogene family / P57729* / Q8QZZ8*ENSGALG0000002801832
RAB23 / ras-related protein Rab-23 / Q9ULC3* / RAB23, member RAS oncogene family*ENSGALG0000001627931
RAB29 / RAB29, member RAS oncogene family / O14966*ENSGALG0000000071229


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032880 regulation of protein localization IEA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IBA
 biological_processGO:0045921 positive regulation of exocytosis IEA
 biological_processGO:0052405 negative regulation by host of symbiont molecular function IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005770 late endosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0042470 melanosome IEA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0019003 GDP binding IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000031681 M6PR / mannose-6-phosphate receptor, cation dependent / P20645* / P24668* / Cation-dependent mannose-6-phosphate receptor *  / complex
 ENSGALG00000011621 IGF2R / cation-independent mannose-6-phosphate receptor precursor / P11717* / Q07113* / insulin like growth factor 2 receptor* / Cation-independent mannose-6-phosphate receptor *  / complex
 ENSGALG00000000579 VAMP3 / vesicle associated membrane protein 3 / P63024* / Q15836*  / complex






 

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