ENSGALG00000017290


Gallus gallus

Features
Gene ID: ENSGALG00000017290
  
Biological name :RAD51AP1
  
Synonyms : RAD51AP1 / RAD51 associated protein 1
  
Possible biological names infered from orthology : Q96B01 / RAD51-associated protein 1 isoform 2
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 73116109
Gene end: 73124781
  
Corresponding Affymetrix probe sets: Gga.12436.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027892
NCBI entrez gene - 419042     See in Manteia.
RefSeq - XM_015292409
RefSeq - XM_015292414
RefSeq - XM_015292421
swissprot - E1C6H8
Ensembl - ENSGALG00000017290
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rad51ap1ENSDARG00000045853Danio rerio
 Q96B01ENSG00000111247Homo sapiens
 Rad51ap1ENSMUSG00000030346Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR031419  RAD51 interacting motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000724 double-strand break repair via homologous recombination IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0010569 regulation of double-strand break repair via homologous recombination IEA
 biological_processGO:0036297 interstrand cross-link repair IEA
 biological_processGO:0071479 cellular response to ionizing radiation IEA
 cellular_componentGO:0000790 nuclear chromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 molecular_functionGO:0003690 double-stranded DNA binding IEA
 molecular_functionGO:0003697 single-stranded DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
HDR through Homologous Recombination (HRR)
Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)
Resolution of D-loop Structures through Holliday Junction Intermediates
Homologous DNA Pairing and Strand Exchange


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000014982 RBBP8 / RB binding protein 8, endonuclease / Q80YR6* / Q99708* / retinoblastoma binding protein 8, endonuclease*  / complex
 ENSGALG00000017073 BRCA2 / BRCA2, DNA repair associated / P51587* / P97929* / Breast cancer type 2 susceptibility protein homolog *  / complex
 ENSGALG00000026865 XRCC2 / X-ray repair cross complementing 2 / O43543* / Q9CX47* / X-ray repair complementing defective repair in Chinese hamster cells 2*  / reaction
 ENSGALG00000040380 RAD51C / RAD51 paralog C / O43502* / Q924H5* / DNA repair 3 *  / reaction
 ENSGALG00000030313 RAD51 / P37383 / DNA repair protein RAD51 homolog 1 / Q08297* / Q06609* / AC012476.1* / DNA repair 1 * / RAD51 recombinase*  / complex
 ENSGALG00000031918 RAD51D / RAD51 paralog D / O55230* / O75771*  / reaction






 

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