ENSGALG00000026231


Gallus gallus

Features
Gene ID: ENSGALG00000026231
  
Biological name :ARID3A
  
Synonyms : ARID3A / AT-rich interaction domain 3A
  
Possible biological names infered from orthology : AT-rich interactive domain-containing protein 3A / Q62431 / Q99856
  
Species: Gallus gallus
  
Chr. number: 28
Strand: 1
Band:
Gene start: 2875145
Gene end: 2898594
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000041111
NCBI entrez gene - 100858440     See in Manteia.
RefSeq - XM_015299994
swissprot - R4GGE4
Ensembl - ENSGALG00000026231
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arid3aENSDARG00000070843Danio rerio
 ARID3AENSG00000116017Homo sapiens
 Arid3aENSMUSG00000019564Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARID3B / AT-rich interaction domain 3B / Q8IVW6* / Q9Z1N7* / AT-rich interactive domain-containing protein 3B *ENSGALG0000000137638
ARID3C / AT-rich interaction domain 3C / A6NKF2* / A6PWV5* / AT-rich interactive domain-containing protein 3C *ENSGALG0000000583934
ARID1B / AT-rich interaction domain 1B / E9Q4N7* / Q8NFD5* / AT-rich interactive domain-containing protein 1B *ENSGALG0000001368321
A2BH40* / ARID1A* / O14497* / AT-rich interaction domain 1A* / AT-rich interactive domain-containing protein 1A *ENSGALG0000002931620
A2BH40* / ARID1A* / O14497* / AT-rich interaction domain 1A* / AT-rich interactive domain-containing protein 1A *ENSGALG000000466593
A2BH40* / ARID1A* / O14497* / AT-rich interaction domain 1A* / AT-rich interactive domain-containing protein 1A *ENSGALG000000450303
A2BH40* / ARID1A* / O14497* / AT-rich interaction domain 1A* / AT-rich interactive domain-containing protein 1A *ENSGALG000000440013
A2BH40* / ARID1A* / O14497* / AT-rich interaction domain 1A* / AT-rich interactive domain-containing protein 1A *ENSGALG000000439363


Protein motifs (from Interpro)
Interpro ID Name
 IPR001606  ARID DNA-binding domain
 IPR023334  REKLES domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0045121 membrane raft IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr