ENSDARG00000070843


Danio rerio

Features
Gene ID: ENSDARG00000070843
  
Biological name :arid3a
  
Synonyms : arid3a / AT rich interactive domain 3A (BRIGHT-like)
  
Possible biological names infered from orthology : AT-rich interaction domain 3A / AT-rich interactive domain-containing protein 3A / Q62431 / Q99856
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 5681762
Gene end: 5810958
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000143781
NCBI entrez gene - 562799     See in Manteia.
swissprot - A0A0N4STX9
ZFIN ID - ZDB-GENE-140106-97
Ensembl - ENSDARG00000070843
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARID3AENSGALG00000026231Gallus gallus
 ARID3AENSG00000116017Homo sapiens
 Arid3aENSMUSG00000019564Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A2BEA6 / arid3c / AT rich interactive domain 3C (BRIGHT-like) / A6NKF2* / A6PWV5* / AT-rich interaction domain 3C* / AT-rich interactive domain-containing protein 3C *ENSDARG0000006772948
arid3b / AT rich interactive domain 3B (BRIGHT-like) / Q9Z1N7* / Q8IVW6* / AT-rich interaction domain 3B* / AT-rich interactive domain-containing protein 3B *ENSDARG0000010403440
arid1ab / AT rich interactive domain 1Ab (SWI-like) / O14497* / ARID1A* / A2BH40* / AT-rich interaction domain 1A* / AT-rich interactive domain-containing protein 1A *ENSDARG0000010189119
arid1b / AT rich interactive domain 1B (SWI1-like) / Q8NFD5* / E9Q4N7* / AT-rich interaction domain 1B* / AT-rich interactive domain-containing protein 1B *ENSDARG0000009250319
arid1aa / AT rich interactive domain 1Aa (SWI-like) / O14497* / ARID1A* / A2BH40* / AT-rich interaction domain 1A* / AT-rich interactive domain-containing protein 1A *ENSDARG0000010171019


Protein motifs (from Interpro)
Interpro ID Name
 IPR001606  ARID DNA-binding domain
 IPR023334  REKLES domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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