ENSGALG00000033608


Gallus gallus

Features
Gene ID: ENSGALG00000033608
  
Biological name :RAB12
  
Synonyms : RAB12 / RAB12, member RAS oncogene family
  
Possible biological names infered from orthology : P35283 / Q6IQ22 / Ras-related protein Rab-12
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 99102470
Gene end: 99124715
  
Corresponding Affymetrix probe sets: Gga.8799.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045336
Ensembl peptide - ENSGALP00000049004
NCBI entrez gene - 421048     See in Manteia.
RefSeq - XM_003640800
swissprot - A0A1D5NY79
swissprot - A0A1D5P8F7
Ensembl - ENSGALG00000033608
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab12ENSDARG00000089428Danio rerio
 RAB12ENSG00000206418Homo sapiens
 Rab12ENSMUSG00000023460Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAB3C / RAB3C, member RAS oncogene family / P62823* / Q96E17*ENSGALG0000001472638
RAB10 / ras-related protein Rab-10 / P61026* / P61027* / RAB10, member RAS oncogene family*ENSGALG0000001653538
RAB8A / Q5F470 / Ras-related protein Rab-8A / P61006* / P55258* / RAB8A, member RAS oncogene family*ENSGALG0000002885136
RAB3A / RAB3A, member RAS oncogene family / P20336* / P63011*ENSGALG0000003006836
RAB8B / RAB8B, member RAS oncogene family / P61028* / Q92930*ENSGALG0000000348735
RASEF / RAS and EF-hand domain containing / Q5RI75* / Q8IZ41* / Ras and EF-hand domain-containing protein homolog *ENSGALG0000001257632
RAB3B / RAB3B, member RAS oncogene family / P20337* / Q9CZT8*ENSGALG0000001056730
RAB44 / RAB44, member RAS oncogene family / Q8CB87* / Ras-related protein Rab-44 *ENSGALG0000000054429
RAB27A / RAB27A, member RAS oncogene family / P51159* / Q9ERI2*ENSGALG0000000443528
ENSGALG0000004648826
ENSGALG0000001518325


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008333 endosome to lysosome transport IEA
 biological_processGO:0016239 positive regulation of macroautophagy IEA
 biological_processGO:0044257 cellular protein catabolic process IEA
 biological_processGO:0071346 cellular response to interferon-gamma IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005776 autophagosome IEA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 cellular_componentGO:0055038 recycling endosome membrane IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0019003 GDP binding IEA


Pathways (from Reactome)
Pathway description
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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