ENSGALG00000036805


Gallus gallus

Features
Gene ID: ENSGALG00000036805
  
Biological name :SPTB
  
Synonyms : spectrin beta, erythrocytic / SPTB
  
Possible biological names infered from orthology : P11277
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 311493
Gene end: 328512
  
Corresponding Affymetrix probe sets: GgaAffx.2086.1.S1_at (Chicken Array)   GgaAffx.2106.1.S1_at (Chicken Array)   GgaAffx.24468.1.S1_at (Chicken Array)   GgaAffx.24468.2.S1_s_at (Chicken Array)   GgaAffx.9246.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058206
NCBI entrez gene - 769410     See in Manteia.
RefSeq - XM_015286286
RefSeq - XM_015286287
swissprot - A0A1D5PYZ8
Ensembl - ENSGALG00000036805
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sptbENSDARG00000030490Danio rerio
 SPTBENSG00000070182Homo sapiens
 SptbENSMUSG00000021061Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SPTBN1 / spectrin beta, non-erythrocytic 1 / Q01082* / Q62261* / Spectrin beta chain, non-erythrocytic 1 *ENSGALG0000002951256
SPTBN5 / spectrin beta, non-erythrocytic 5 / Q9NRC6*ENSGALG0000000894028
SPTAN1 / spectrin alpha chain, non-erythrocytic 1 / P16546* / Q13813* / spectrin alpha, non-erythrocytic 1*ENSGALG0000000471921
ACTN2 / P20111 / Alpha-actinin-2 / P35609* / Q9JI91* / actinin alpha 2*ENSGALG0000001446311
ACTN1 / P05094 / Alpha-actinin-1 / P12814* / Q7TPR4* / actinin alpha 1* / Mus musculus actinin, alpha 1 (Actn1), transcript variant 2, mRNA.*ENSGALG0000004245811


Protein motifs (from Interpro)
Interpro ID Name
 IPR001589  Actinin-type actin-binding domain, conserved site
 IPR001605  Pleckstrin homology domain, spectrin-type
 IPR001715  Calponin homology domain
 IPR001849  Pleckstrin homology domain
 IPR002017  Spectrin repeat
 IPR011993  PH-like domain superfamily
 IPR016343  Spectrin, beta subunit
 IPR018159  Spectrin/alpha-actinin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0051693 actin filament capping IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0008091 spectrin IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IEA
 molecular_functionGO:0005543 phospholipid binding IEA


Pathways (from Reactome)
Pathway description
NCAM signaling for neurite out-growth
RAF/MAP kinase cascade
COPI-mediated anterograde transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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