ENSGALG00000037632


Gallus gallus

Features
Gene ID: ENSGALG00000037632
  
Biological name :NKX2-1
  
Synonyms : homeobox protein Nkx-2.1 / NKX2-1
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 36673811
Gene end: 36676121
  
Corresponding Affymetrix probe sets: Gga.952.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055123
NCBI entrez gene - 395322     See in Manteia.
RefSeq - NM_204616
RefSeq - XM_015287273
RefSeq - XM_015287274
RefSeq Peptide - NP_989947
swissprot - A0A1D5PQG0
Ensembl - ENSGALG00000037632
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nkx2.1ENSDARG00000019835Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NKX2-4 / NK2 homeobox 4 / Q9EQM3* / Q9H2Z4* / Homeobox protein Nkx-2.4 *ENSGALG0000003583545
NKX2-3 / NK2 homeobox 3 / P97334* / Q8TAU0* / Homeobox protein Nkx-2.3 *ENSGALG0000003093229
NKX2-2 / NK2 homeobox 2 / O95096* / P42586*ENSGALG0000003686929
NKX2-5 / homeobox protein Nkx-2.5 ENSGALG0000000288628
NKX2-6 / homeobox protein Nkx-2.6 ENSGALG0000000036525
NKX2-8 / NK2 homeobox 8 / Nkx2-9* / O15522* / O70584* / Homeobox protein Nkx-2.8 *ENSGALG0000002848323
NKX3-2 / homeobox protein Nkx-3.2 / P78367* / P97503* / NK3 homeobox 2*ENSGALG0000003185920
HMX1 / homeobox protein HMX1 ENSGALG0000004206215
HMX3 / homeobox protein HMX3 / A6NHT5* / P42581* / H6 family homeobox 3*ENSGALG0000002341515
HMX2 / H6 family homeobox 2 / A2RU54* / P43687* / Homeobox protein HMX2 *ENSGALG0000003087514
SOHO-1 / sensory organ homeobox protein SOHo / HMX1* / O70218* / Q9NP08* / H6 family homeobox 1* / Homeobox protein HMX1 *ENSGALG0000001559912


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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