ENSGALG00000035835


Gallus gallus

Features
Gene ID: ENSGALG00000035835
  
Biological name :NKX2-4
  
Synonyms : NK2 homeobox 4 / NKX2-4
  
Possible biological names infered from orthology : Homeobox protein Nkx-2.4 / Q9EQM3 / Q9H2Z4
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 3544031
Gene end: 3544932
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000049097
NCBI entrez gene - 107052856     See in Manteia.
RefSeq - XM_015283430
swissprot - A0A1D5P8P8
Ensembl - ENSGALG00000035835
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NKX2-4ENSG00000125816Homo sapiens
 Nkx2-4ENSMUSG00000054160Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NKX2-1 / homeobox protein Nkx-2.1 ENSGALG0000003763263
NKX2-3 / NK2 homeobox 3 / P97334* / Q8TAU0* / Homeobox protein Nkx-2.3 *ENSGALG0000003093236
NKX2-2 / NK2 homeobox 2 / O95096* / P42586*ENSGALG0000003686934
NKX2-5 / homeobox protein Nkx-2.5 ENSGALG0000000288633
NKX2-8 / NK2 homeobox 8 / Nkx2-9* / O15522* / O70584* / Homeobox protein Nkx-2.8 *ENSGALG0000002848329
NKX2-6 / homeobox protein Nkx-2.6 ENSGALG0000000036528
NKX3-2 / homeobox protein Nkx-3.2 / P78367* / P97503* / NK3 homeobox 2*ENSGALG0000003185925
HMX1 / homeobox protein HMX1 ENSGALG0000004206220
HMX3 / homeobox protein HMX3 / A6NHT5* / P42581* / H6 family homeobox 3*ENSGALG0000002341520
HMX2 / H6 family homeobox 2 / A2RU54* / P43687* / Homeobox protein HMX2 *ENSGALG0000003087518
SOHO-1 / sensory organ homeobox protein SOHo / HMX1* / O70218* / Q9NP08* / H6 family homeobox 1* / Homeobox protein HMX1 *ENSGALG0000001559918


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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