ENSGALG00000042062


Gallus gallus

Features
Gene ID: ENSGALG00000042062
  
Biological name :HMX1
  
Synonyms : HMX1 / homeobox protein HMX1
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 81985622
Gene end: 81988717
  
Corresponding Affymetrix probe sets: Gga.14432.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044386
Ensembl peptide - ENSGALP00000054370
NCBI entrez gene - 396546     See in Manteia.
RefSeq - NM_205533
RefSeq Peptide - NP_990864
swissprot - A0A1D5PND0
swissprot - A0A1D5NVL1
Ensembl - ENSGALG00000042062
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hmx1ENSDARG00000095651Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HMX3 / homeobox protein HMX3 / A6NHT5* / P42581* / H6 family homeobox 3*ENSGALG0000002341538
SOHO-1 / sensory organ homeobox protein SOHo / HMX1* / O70218* / Q9NP08* / H6 family homeobox 1* / Homeobox protein HMX1 *ENSGALG0000001559927
HMX2 / H6 family homeobox 2 / A2RU54* / P43687* / Homeobox protein HMX2 *ENSGALG0000003087527
NKX3-2 / homeobox protein Nkx-3.2 / P78367* / P97503* / NK3 homeobox 2*ENSGALG0000003185924
NKX2-3 / NK2 homeobox 3 / P97334* / Q8TAU0* / Homeobox protein Nkx-2.3 *ENSGALG0000003093219
NKX2-5 / homeobox protein Nkx-2.5 ENSGALG0000000288618
NKX2-1 / homeobox protein Nkx-2.1 ENSGALG0000003763217
NKX2-6 / homeobox protein Nkx-2.6 ENSGALG0000000036516
NKX2-4 / NK2 homeobox 4 / Q9EQM3* / Q9H2Z4* / Homeobox protein Nkx-2.4 *ENSGALG0000003583516
NKX2-2 / NK2 homeobox 2 / O95096* / P42586*ENSGALG0000003686916
NKX2-8 / NK2 homeobox 8 / Nkx2-9* / O15522* / O70584* / Homeobox protein Nkx-2.8 *ENSGALG0000002848314


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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