ENSGALG00000039171


Gallus gallus

Features
Gene ID: ENSGALG00000039171
  
Biological name :RAD52
  
Synonyms : DNA repair protein RAD52 homolog isoform 2 / RAD52
  
Possible biological names infered from orthology : P43351 / P43352 / RAD52 homolog, DNA repair protein
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 60605354
Gene end: 60617652
  
Corresponding Affymetrix probe sets: Gga.885.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045051
Ensembl peptide - ENSGALP00000063584
NCBI entrez gene - 418152     See in Manteia.
RefSeq - XM_015285790
RefSeq - NM_001167758
RefSeq - NM_001167759
RefSeq - XM_015285770
RefSeq - XM_015285779
RefSeq Peptide - NP_001161231
RefSeq Peptide - NP_001161230
swissprot - A0A1L1RXL6
swissprot - A0A1D5NXF5
Ensembl - ENSGALG00000039171
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rad52ENSDARG00000005274Danio rerio
 RAD52ENSG00000002016Homo sapiens
 Rad52ENSMUSG00000030166Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004585  DNA recombination/repair protein Rad52
 IPR007232  DNA repair protein Rad52/59/22


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000724 double-strand break repair via homologous recombination IEA
 biological_processGO:0000730 DNA recombinase assembly IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006310 DNA recombination IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0010792 DNA double-strand break processing involved in repair via single-strand annealing IEA
 biological_processGO:0034599 cellular response to oxidative stress IEA
 biological_processGO:0045002 double-strand break repair via single-strand annealing IEA
 biological_processGO:0051260 protein homooligomerization IEA
 biological_processGO:2000819 regulation of nucleotide-excision repair IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0032993 protein-DNA complex IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003697 single-stranded DNA binding IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
SUMOylation of DNA damage response and repair proteins
HDR through Single Strand Annealing (SSA)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000003875 ABL1 / ABL proto-oncogene 1, non-receptor tyrosine kinase / P00519* / P00520* / c-abl oncogene 1, non-receptor tyrosine kinase*  / reaction
 ENSGALG00000008435 SUMO1 / Q8QGH2 / Small ubiquitin-related modifier 1 / P63166* / P63165* / small ubiquitin-like modifier 1*  / complex / reaction
 ENSGALG00000030313 RAD51 / P37383 / DNA repair protein RAD51 homolog 1 / Q08297* / Q06609* / AC012476.1* / DNA repair 1 * / RAD51 recombinase*  / complex / reaction
 ENSGALG00000039171 RAD52 / DNA repair protein RAD52 homolog isoform 2 / P43351* / P43352* / RAD52 homolog, DNA repair protein*  / reaction / complex
 ENSGALG00000006428 UBE2I / P63283 / SUMO-conjugating enzyme UBC9 / P63280* / P63279* / ubiquitin conjugating enzyme E2 I*  / reaction






 

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