ENSMUSG00000020541


Mus musculus

Features
Gene ID: ENSMUSG00000020541
  
Biological name :Tom1l1
  
Synonyms : Q923U0 / target of myb1-like 1 (chicken) / Tom1l1
  
Possible biological names infered from orthology : O75674 / target of myb1 like 1 membrane trafficking protein
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: D
Gene start: 90643465
Gene end: 90688366
  
Corresponding Affymetrix probe sets: 10389816 (MoGene1.0st)   1439337_at (Mouse Genome 430 2.0 Array)   1451117_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000103499
Ensembl peptide - ENSMUSP00000103501
Ensembl peptide - ENSMUSP00000123329
Ensembl peptide - ENSMUSP00000020849
Ensembl peptide - ENSMUSP00000103500
NCBI entrez gene - 71943     See in Manteia.
MGI - MGI:1919193
RefSeq - XM_006534269
RefSeq - NM_001357544
RefSeq - NM_001357547
RefSeq - NM_028011
RefSeq - XM_006534268
RefSeq Peptide - NP_001344476
RefSeq Peptide - NP_082287
RefSeq Peptide - NP_001344472
RefSeq Peptide - NP_001344473
swissprot - Q8BZR6
swissprot - Q923U0
swissprot - A6PWP3
Ensembl - ENSMUSG00000020541
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TOM1L1ENSGALG00000003011Gallus gallus
 O75674ENSG00000141198Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5SRX1 / Tom1l2 / TOM1-like protein 2 / Q6ZVM7* / target of myb1 like 2 membrane trafficking protein*ENSMUSG0000000053830
Tom1 / O88746 / target of myb1 trafficking protein / O60784* / target of myb1 membrane trafficking protein*ENSMUSG0000004287027
Gga3 / Q8BMI3 / ADP-ribosylation factor-binding protein GGA3 / Q9NZ52* / golgi associated, gamma adaptin ear containing, ARF binding protein 3*ENSMUSG0000002074021
Gga1 / Q8R0H9 / ADP-ribosylation factor-binding protein GGA1 / Q9UJY5* / golgi associated, gamma adaptin ear containing, ARF binding protein 1*ENSMUSG0000003312821
Gga2 / Q6P5E6 / ADP-ribosylation factor-binding protein GGA2 / Q9UJY4* / golgi associated, gamma adaptin ear containing, ARF binding protein 2*ENSMUSG0000003087217


Protein motifs (from Interpro)
Interpro ID Name
 IPR002014  VHS domain
 IPR004152  GAT domain
 IPR008942  ENTH/VHS
 IPR014645  Target of Myb protein 1
 IPR027428  TOM1-like protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway TAS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0031954 positive regulation of protein autophosphorylation IEA
 biological_processGO:0032147 activation of protein kinase activity IEA
 biological_processGO:0045839 negative regulation of mitotic nuclear division IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005795 Golgi stack IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0017124 SH3 domain binding IEA
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0030276 clathrin binding IEA
 molecular_functionGO:0030295 protein kinase activator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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