ENSMUSG00000022228


Mus musculus

Features
Gene ID: ENSMUSG00000022228
  
Biological name :Zscan26
  
Synonyms : Q5RJ54 / zinc finger and SCAN domain containing 26 / Zscan26
  
Possible biological names infered from orthology : Q16670
  
Species: Mus musculus
  
Chr. number: 13
Strand: -1
Band: A3.1
Gene start: 21442180
Gene end: 21453730
  
Corresponding Affymetrix probe sets: 10408032 (MoGene1.0st)   1457285_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000032820
Ensembl peptide - ENSMUSP00000106111
NCBI entrez gene - 432731     See in Manteia.
MGI - MGI:3531417
RefSeq - XM_011244318
RefSeq - NM_001013786
RefSeq - NM_001347491
RefSeq - XM_006516710
RefSeq - XM_006516711
RefSeq Peptide - NP_001013808
RefSeq Peptide - NP_001334420
swissprot - Q5RJ54
swissprot - F8WJ31
Ensembl - ENSMUSG00000022228
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q16670ENSG00000197062Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zkscan8 / zinc finger with KRAB and SCAN domains 8 / Q15776*ENSMUSG0000006389446
Zfp397 / zinc finger protein 397 / Q8NF99* / ZNF397*ENSMUSG0000002427642
Q8BGS3 / Zkscan1 / zinc finger with KRAB and SCAN domains 1 / P17029*ENSMUSG0000002972941
Zscan22 / zinc finger and SCAN domain containing 22 / P10073*ENSMUSG0000005471538
Q9Z1D7 / Zscan12 / zinc finger and SCAN domain containing 12 / O43309*ENSMUSG0000003672137
Zkscan4 / zinc finger with KRAB and SCAN domains 4 / Q969J2* / Q9BRR0* / ZKSCAN3* / zinc finger with KRAB and SCAN domains 3*ENSMUSG0000005493136
Zkscan3 / zinc finger with KRAB and SCAN domains 3 / Q9BRR0* / Q969J2* / ZKSCAN4* / zinc finger with KRAB and SCAN domains 4*ENSMUSG0000002132735
Q07231 / Zscan21 / zinc finger and SCAN domain containing 21 / Q9Y5A6*ENSMUSG0000003701732
Zfp24 / Q91VN1 / zinc finger protein 24 / ZNF24* / P17028*ENSMUSG0000005146929


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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