ENSMUSG00000063894


Mus musculus

Features
Gene ID: ENSMUSG00000063894
  
Biological name :Zkscan8
  
Synonyms : zinc finger with KRAB and SCAN domains 8 / Zkscan8
  
Possible biological names infered from orthology : Q15776
  
Species: Mus musculus
  
Chr. number: 13
Strand: -1
Band: A3.1
Gene start: 21513222
Gene end: 21531120
  
Corresponding Affymetrix probe sets: 10408049 (MoGene1.0st)   1430334_at (Mouse Genome 430 2.0 Array)   1455778_at (Mouse Genome 430 2.0 Array)   1457756_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000153171
Ensembl peptide - ENSMUSP00000040248
Ensembl peptide - ENSMUSP00000106107
Ensembl peptide - ENSMUSP00000116058
NCBI entrez gene - 93681     See in Manteia.
MGI - MGI:1913815
RefSeq - XM_017315646
RefSeq - NM_001251833
RefSeq - NM_001251834
RefSeq - NM_139141
RefSeq Peptide - NP_631880
RefSeq Peptide - NP_001238762
RefSeq Peptide - NP_001238763
swissprot - A0A286YCX3
swissprot - D3Z716
swissprot - Q78WV9
swissprot - Q8BSL0
Ensembl - ENSMUSG00000063894
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q15776ENSG00000198315Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zfp397 / zinc finger protein 397 / Q8NF99* / ZNF397*ENSMUSG0000002427644
Q8BGS3 / Zkscan1 / zinc finger with KRAB and SCAN domains 1 / P17029*ENSMUSG0000002972943
Zkscan3 / zinc finger with KRAB and SCAN domains 3 / Q9BRR0* / Q969J2* / ZKSCAN4* / zinc finger with KRAB and SCAN domains 4*ENSMUSG0000002132738
Q9Z1D7 / Zscan12 / zinc finger and SCAN domain containing 12 / O43309*ENSMUSG0000003672136
Q5RJ54 / Zscan26 / zinc finger and SCAN domain containing 26 / Q16670*ENSMUSG0000002222836
Zkscan4 / zinc finger with KRAB and SCAN domains 4 / Q969J2* / Q9BRR0* / ZKSCAN3* / zinc finger with KRAB and SCAN domains 3*ENSMUSG0000005493134
Q07231 / Zscan21 / zinc finger and SCAN domain containing 21 / Q9Y5A6*ENSMUSG0000003701733
Zscan22 / zinc finger and SCAN domain containing 22 / P10073*ENSMUSG0000005471533
Zfp24 / Q91VN1 / zinc finger protein 24 / ZNF24* / P17028*ENSMUSG0000005146929


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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