ENSMUSG00000054715


Mus musculus

Features
Gene ID: ENSMUSG00000054715
  
Biological name :Zscan22
  
Synonyms : zinc finger and SCAN domain containing 22 / Zscan22
  
Possible biological names infered from orthology : P10073
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: A1
Gene start: 12897815
Gene end: 12909083
  
Corresponding Affymetrix probe sets: 10550047 (MoGene1.0st)   1424789_at (Mouse Genome 430 2.0 Array)   1436360_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000057651
Ensembl peptide - ENSMUSP00000112684
Ensembl peptide - ENSMUSP00000113314
Ensembl peptide - ENSMUSP00000113486
NCBI entrez gene - 232878     See in Manteia.
MGI - MGI:2443312
RefSeq - NM_001290441
RefSeq - NM_001001447
RefSeq - NM_001290436
RefSeq - NM_001290438
RefSeq - NM_001290440
RefSeq - NM_001290442
RefSeq Peptide - NP_001001447
RefSeq Peptide - NP_001277365
RefSeq Peptide - NP_001277367
RefSeq Peptide - NP_001277369
RefSeq Peptide - NP_001277370
RefSeq Peptide - NP_001277371
swissprot - Q3TQC3
swissprot - Q8BGS5
Ensembl - ENSMUSG00000054715
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P10073ENSG00000182318Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zfp397 / zinc finger protein 397 / Q8NF99* / ZNF397*ENSMUSG0000002427641
Zkscan8 / zinc finger with KRAB and SCAN domains 8 / Q15776*ENSMUSG0000006389440
Zkscan3 / zinc finger with KRAB and SCAN domains 3 / Q9BRR0* / Q969J2* / ZKSCAN4* / zinc finger with KRAB and SCAN domains 4*ENSMUSG0000002132737
Q8BGS3 / Zkscan1 / zinc finger with KRAB and SCAN domains 1 / P17029*ENSMUSG0000002972936
Zkscan4 / zinc finger with KRAB and SCAN domains 4 / Q969J2* / Q9BRR0* / ZKSCAN3* / zinc finger with KRAB and SCAN domains 3*ENSMUSG0000005493136
Q9Z1D7 / Zscan12 / zinc finger and SCAN domain containing 12 / O43309*ENSMUSG0000003672135
Q5RJ54 / Zscan26 / zinc finger and SCAN domain containing 26 / Q16670*ENSMUSG0000002222835
Q07231 / Zscan21 / zinc finger and SCAN domain containing 21 / Q9Y5A6*ENSMUSG0000003701733
Zfp24 / Q91VN1 / zinc finger protein 24 / ZNF24* / P17028*ENSMUSG0000005146928


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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