ENSMUSG00000025469


Mus musculus

Features
Gene ID: ENSMUSG00000025469
  
Biological name :Msx3
  
Synonyms : Msx3 / Mus musculus msh homeobox 3 (Msx3), transcript variant 2, mRNA. / P70354
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: F4
Gene start: 140046157
Gene end: 140049089
  
Corresponding Affymetrix probe sets: 10568916 (MoGene1.0st)   1421597_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000057312
Ensembl peptide - ENSMUSP00000133484
NCBI entrez gene - 17703     See in Manteia.
MGI - MGI:106587
RefSeq - XM_006536161
RefSeq - NM_001347609
RefSeq - NM_010836
RefSeq Peptide - NP_001334538
RefSeq Peptide - NP_034966
swissprot - B2RPS3
swissprot - G3X9C7
swissprot - P70354
Ensembl - ENSMUSG00000025469
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 msx1bENSDARG00000008886Danio rerio
 msx3ENSDARG00000015674Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Msx1 / P13297 / Homeobox protein MSX-1 / P28360* / msh homeobox 1*ENSMUSG0000004845059
Msx2 / Q03358 / Homeobox protein MSX-2 / P35548* / msh homeobox 2*ENSMUSG0000002146955
Dlx2 / P40764 / Homeobox protein DLX-2 / Q07687* / distal-less homeobox 2*ENSMUSG0000002339125
Dlx6 / P70397 / Homeobox protein DLX-6 / P56179* / distal-less homeobox 6*ENSMUSG0000002975424
Dlx1 / Q64317 / Homeobox protein DLX-1 / P56177* / distal-less homeobox 1*ENSMUSG0000004191124
Dlx3 / Q64205 / Homeobox protein DLX-3 / O60479* / distal-less homeobox 3*ENSMUSG0000000151024
Dlx5 / P70396 / Homeobox protein DLX-5 / P56178* / distal-less homeobox 5*ENSMUSG0000002975523
Dlx4 / P70436 / Homeobox protein DLX-4 / Q92988* / distal-less homeobox 4*ENSMUSG0000002087123


Protein motifs (from Interpro)
Interpro ID Name
 IPR000047  Helix-turn-helix motif
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IGI
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IDA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0035067 negative regulation of histone acetylation IGI
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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