ENSMUSG00000028600


Mus musculus

Features
Gene ID: ENSMUSG00000028600
  
Biological name :Podn
  
Synonyms : Podn / podocan / Q7TQ62
  
Possible biological names infered from orthology : Q7Z5L7
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: C7
Gene start: 108014791
Gene end: 108096445
  
Corresponding Affymetrix probe sets: 10514939 (MoGene1.0st)   1435180_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000102320
Ensembl peptide - ENSMUSP00000048962
Ensembl peptide - ENSMUSP00000102319
Ensembl peptide - ENSMUSP00000121478
Ensembl peptide - ENSMUSP00000123184
NCBI entrez gene - 242608     See in Manteia.
MGI - MGI:2674939
RefSeq - XM_011240533
RefSeq - NM_001285956
RefSeq - NM_001285958
RefSeq - NM_172874
RefSeq - XM_006503092
RefSeq - XM_011240532
RefSeq Peptide - NP_766462
RefSeq Peptide - NP_001272885
RefSeq Peptide - NP_001272887
swissprot - Q6P3D8
swissprot - Q7TQ62
swissprot - F6XS92
Ensembl - ENSMUSG00000028600
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 podnENSDARG00000019025Danio rerio
 PODNENSGALG00000021869Gallus gallus
 PODNENSG00000174348Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Podnl1 / Q6P3Y9 / Podocan-like protein 1 / Q6PEZ8* / podocan like 1*ENSMUSG0000001288945
Ecm2 / Q5FW85 / Extracellular matrix protein 2 / O94769*ENSMUSG0000004363122
Fmod / P50608 / Fibromodulin / Q06828*ENSMUSG0000004155916
Omd / O35103 / Osteomodulin / Q99983*ENSMUSG0000004836816
Prelp / Q9JK53 / proline arginine-rich end leucine-rich repeat / P51888* / proline and arginine rich end leucine rich repeat protein*ENSMUSG0000004157715
Bgn / P28653 / biglycan / P21810*ENSMUSG0000003137515
Dcn / P28654 / Decorin / P07585*ENSMUSG0000001992915
Kera / O35367 / Keratocan / O60938*ENSMUSG0000001993215
Aspn / Q99MQ4 / Asporin / Q9BXN1*ENSMUSG0000002138814
Lum / P51885 / Lumican / P51884*ENSMUSG0000003644614


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006469 negative regulation of protein kinase activity IBA
 biological_processGO:0008285 negative regulation of cell proliferation ISO
 biological_processGO:0019221 cytokine-mediated signaling pathway IBA
 biological_processGO:0030336 negative regulation of cell migration ISS
 biological_processGO:0046426 negative regulation of JAK-STAT cascade IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space ISO
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0031012 extracellular matrix ISO
 molecular_functionGO:0004860 protein kinase inhibitor activity IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005518 collagen binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001415 increased exploration in new environment "greater amount of time spent investigating new location" [J:28825]
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Allelic Composition: Pik3c2atm1b(EUCOMM)Hmgu/Pik3c2a+
Genetic Background: C57BL/6N-Pik3c2atm1b(EUCOMM)Hmgu/Tcp

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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