ENSMUSG00000048368


Mus musculus

Features
Gene ID: ENSMUSG00000048368
  
Biological name :Omd
  
Synonyms : O35103 / Omd / Osteomodulin
  
Possible biological names infered from orthology : Q99983
  
Species: Mus musculus
  
Chr. number: 13
Strand: 1
Band: A5
Gene start: 49582462
Gene end: 49592822
  
Corresponding Affymetrix probe sets: 10405058 (MoGene1.0st)   1418745_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000065706
Ensembl peptide - ENSMUSP00000152066
NCBI entrez gene - 27047     See in Manteia.
MGI - MGI:1350918
RefSeq - XM_017315520
RefSeq - NM_012050
RefSeq - XM_006516928
RefSeq Peptide - NP_036180
swissprot - O35103
Ensembl - ENSMUSG00000048368
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 omdENSDARG00000093600Danio rerio
 OMDENSGALG00000026080Gallus gallus
 OMDENSG00000127083Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Kera / O35367 / Keratocan / O60938*ENSMUSG0000001993232
Prelp / Q9JK53 / proline arginine-rich end leucine-rich repeat / P51888* / proline and arginine rich end leucine rich repeat protein*ENSMUSG0000004157732
Lum / P51885 / Lumican / P51884*ENSMUSG0000003644631
Fmod / P50608 / Fibromodulin / Q06828*ENSMUSG0000004155931
Ecm2 / Q5FW85 / Extracellular matrix protein 2 / O94769*ENSMUSG0000004363122
Podn / Q7TQ62 / podocan / Q7Z5L7*ENSMUSG0000002860022
Podnl1 / Q6P3Y9 / Podocan-like protein 1 / Q6PEZ8* / podocan like 1*ENSMUSG0000001288921
Bgn / P28653 / biglycan / P21810*ENSMUSG0000003137521
Aspn / Q99MQ4 / Asporin / Q9BXN1*ENSMUSG0000002138820
Dcn / P28654 / Decorin / P07585*ENSMUSG0000001992920


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR030705  Osteomodulin
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0030500 regulation of bone mineralization IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis
Keratan sulfate degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0009456 impaired cued conditioning behavior "decrease in the ability of an animal to learn and remember an association between an aversive experience (the unconditioned stimulus (US), usually a shock) and a neutral stimulus (the conditioned stimulus (CS), usually an auditory cue or light flash)" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Slc12a6Gt(OST458419)Lex/Slc12a6Gt(OST458419)Lex
Genetic Background: involves: 129S5/SvEvBrd * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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