ENSDARG00000093600


Danio rerio

Features
Gene ID: ENSDARG00000093600
  
Biological name :omd
  
Synonyms : omd / osteomodulin
  
Possible biological names infered from orthology : O35103 / Q99983
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 10463890
Gene end: 10470663
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000120226
NCBI entrez gene - 557913     See in Manteia.
RefSeq - XM_017353401
swissprot - F6NL91
ZFIN ID - ZDB-GENE-060503-756
Ensembl - ENSDARG00000093600
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OMDENSGALG00000026080Gallus gallus
 OMDENSG00000127083Homo sapiens
 OmdENSMUSG00000048368Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
prelp / proline/arginine-rich end leucine-rich repeat protein / Q9JK53* / P51888* / proline arginine-rich end leucine-rich repeat* / proline and arginine rich end leucine rich repeat protein*ENSDARG0000007059731
kera / Q5RI43 / keratocan / O35367* / O60938*ENSDARG0000005693831
fmodb / fibromodulin b / FMOD* / P50608* / Q06828* / fibromodulin*ENSDARG0000001029429
lum / lumican / P51884* / P51885*ENSDARG0000004558029
zgc:113307ENSDARG0000004489429
fmoda / fibromodulin a / FMOD* / P50608* / Q06828* / fibromodulin*ENSDARG0000004489528
aspn / asporin (LRR class 1) / Q99MQ4* / Q9BXN1* / asporin*ENSDARG0000000219223
podn / podocan / Q7TQ62* / Q7Z5L7*ENSDARG0000001902523
si:dkey-6n6.1ENSDARG0000006248723
dcn / decorin / P07585* / P28654*ENSDARG0000001206622
bgnb / biglycan b / BGN* / P21810* / P28653* / biglycan*ENSDARG0000000294522
si:dkey-32e6.6ENSDARG0000007085722
ecm2 / extracellular matrix protein 2, female organ and adipocyte specific / O94769* / Q5FW85* / extracellular matrix protein 2*ENSDARG0000007154922
wu:fc23c09ENSDARG0000008800221
bgna / biglycan a / BGN* / P21810* / P28653* / biglycan*ENSDARG0000001788421


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR030705  Osteomodulin
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030500 regulation of bone mineralization IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0031012 extracellular matrix IEA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis
Keratan sulfate degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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