ENSDARG00000044894


Danio rerio

Features
Gene ID: ENSDARG00000044894
  
Biological name :zgc:113307
  
Synonyms : zgc:113307
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 21050326
Gene end: 21061566
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000065983
Ensembl peptide - ENSDARP00000147534
NCBI entrez gene - 553753     See in Manteia.
RefSeq - NM_001020724
RefSeq Peptide - NP_001018560
swissprot - F1QG52
ZFIN ID - ZDB-GENE-050522-29
Ensembl - ENSDARG00000044894
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fmoda / fibromodulin a / FMOD* / P50608* / Q06828* / fibromodulin*ENSDARG0000004489536
lum / lumican / P51884* / P51885*ENSDARG0000004558034
fmodb / fibromodulin b / FMOD* / P50608* / Q06828* / fibromodulin*ENSDARG0000001029434
kera / Q5RI43 / keratocan / O35367* / O60938*ENSDARG0000005693832
omd / osteomodulin / O35103* / Q99983*ENSDARG0000009360032
prelp / proline/arginine-rich end leucine-rich repeat protein / Q9JK53* / P51888* / proline arginine-rich end leucine-rich repeat* / proline and arginine rich end leucine rich repeat protein*ENSDARG0000007059732
bgnb / biglycan b / BGN* / P21810* / P28653* / biglycan*ENSDARG0000000294529
bgna / biglycan a / BGN* / P21810* / P28653* / biglycan*ENSDARG0000001788428
ecm2 / extracellular matrix protein 2, female organ and adipocyte specific / O94769* / Q5FW85* / extracellular matrix protein 2*ENSDARG0000007154928
si:dkey-6n6.1ENSDARG0000006248728
podn / podocan / Q7TQ62* / Q7Z5L7*ENSDARG0000001902526
dcn / decorin / P07585* / P28654*ENSDARG0000001206626
si:dkey-32e6.6ENSDARG0000007085725
wu:fc23c09ENSDARG0000008800225
aspn / asporin (LRR class 1) / Q99MQ4* / Q9BXN1* / asporin*ENSDARG0000000219225


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR027219  Lumican
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0005518 collagen binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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