ENSDARG00000071549


Danio rerio

Features
Gene ID: ENSDARG00000071549
  
Biological name :ecm2
  
Synonyms : ecm2 / extracellular matrix protein 2, female organ and adipocyte specific
  
Possible biological names infered from orthology : extracellular matrix protein 2 / O94769 / Q5FW85
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 10490937
Gene end: 10502780
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000116963
NCBI entrez gene - 558224     See in Manteia.
swissprot - F1R2S9
ZFIN ID - ZDB-GENE-050208-651
Ensembl - ENSDARG00000071549
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ECM2ENSGALG00000004695Gallus gallus
 ECM2ENSG00000106823Homo sapiens
 Ecm2ENSMUSG00000043631Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-6n6.1ENSDARG0000006248732
si:dkey-32e6.6ENSDARG0000007085721
wu:fc23c09ENSDARG0000008800219
podn / podocan / Q7TQ62* / Q7Z5L7*ENSDARG0000001902517
fmodb / fibromodulin b / FMOD* / P50608* / Q06828* / fibromodulin*ENSDARG0000001029415
zgc:113307ENSDARG0000004489414
bgnb / biglycan b / BGN* / P21810* / P28653* / biglycan*ENSDARG0000000294514
bgna / biglycan a / BGN* / P21810* / P28653* / biglycan*ENSDARG0000001788414
fmoda / fibromodulin a / FMOD* / P50608* / Q06828* / fibromodulin*ENSDARG0000004489514
prelp / proline/arginine-rich end leucine-rich repeat protein / Q9JK53* / P51888* / proline arginine-rich end leucine-rich repeat* / proline and arginine rich end leucine rich repeat protein*ENSDARG0000007059713
lum / lumican / P51884* / P51885*ENSDARG0000004558013
dcn / decorin / P07585* / P28654*ENSDARG0000001206613
kera / Q5RI43 / keratocan / O35367* / O60938*ENSDARG0000005693813
aspn / asporin (LRR class 1) / Q99MQ4* / Q9BXN1* / asporin*ENSDARG0000000219212
omd / osteomodulin / O35103* / Q99983*ENSDARG0000009360012


Protein motifs (from Interpro)
Interpro ID Name
 IPR001007  VWFC domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0008201 heparin binding IBA
 molecular_functionGO:0070052 collagen V binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr