ENSDARG00000017884


Danio rerio

Features
Gene ID: ENSDARG00000017884
  
Biological name :bgna
  
Synonyms : bgna / biglycan a
  
Possible biological names infered from orthology : BGN / biglycan / P21810 / P28653
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 14104496
Gene end: 14126646
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000017536
Ensembl peptide - ENSDARP00000156458
NCBI entrez gene - 431774     See in Manteia.
RefSeq - NM_001002227
RefSeq Peptide - NP_001002227
swissprot - Q6GMI5
ZFIN ID - ZDB-GENE-040704-74
Ensembl - ENSDARG00000017884
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BGNENSG00000182492Homo sapiens
 BgnENSMUSG00000031375Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
bgnb / biglycan b / BGN* / P21810* / P28653* / biglycan*ENSDARG0000000294567
aspn / asporin (LRR class 1) / Q99MQ4* / Q9BXN1* / asporin*ENSDARG0000000219250
dcn / decorin / P07585* / P28654*ENSDARG0000001206650
ecm2 / extracellular matrix protein 2, female organ and adipocyte specific / O94769* / Q5FW85* / extracellular matrix protein 2*ENSDARG0000007154928
lum / lumican / P51884* / P51885*ENSDARG0000004558027
si:dkey-6n6.1ENSDARG0000006248727
zgc:113307ENSDARG0000004489427
fmoda / fibromodulin a / FMOD* / P50608* / Q06828* / fibromodulin*ENSDARG0000004489527
wu:fc23c09ENSDARG0000008800226
fmodb / fibromodulin b / FMOD* / P50608* / Q06828* / fibromodulin*ENSDARG0000001029425
si:dkey-32e6.6ENSDARG0000007085725
prelp / proline/arginine-rich end leucine-rich repeat protein / Q9JK53* / P51888* / proline arginine-rich end leucine-rich repeat* / proline and arginine rich end leucine rich repeat protein*ENSDARG0000007059724
omd / osteomodulin / O35103* / Q99983*ENSDARG0000009360023
kera / Q5RI43 / keratocan / O35367* / O60938*ENSDARG0000005693823
podn / podocan / Q7TQ62* / Q7Z5L7*ENSDARG0000001902521


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR016352  Small leucine-rich proteoglycan, class I, decorin/asporin/byglycan
 IPR028547  Biglycan
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006469 negative regulation of protein kinase activity IBA
 biological_processGO:0019221 cytokine-mediated signaling pathway IBA
 biological_processGO:0046426 negative regulation of JAK-STAT cascade IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004860 protein kinase inhibitor activity IBA


Pathways (from Reactome)
Pathway description
A tetrasaccharide linker sequence is required for GAG synthesis
Chondroitin sulfate biosynthesis
Dermatan sulfate biosynthesis
CS/DS degradation
ECM proteoglycans


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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