ENSG00000127083


Homo sapiens

Features
Gene ID: ENSG00000127083
  
Biological name :OMD
  
Synonyms : OMD / osteomodulin / Q99983
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q22.31
Gene start: 92414245
Gene end: 92424461
  
Corresponding Affymetrix probe sets: 205907_s_at (Human Genome U133 Plus 2.0 Array)   205908_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000364700
NCBI entrez gene - 4958     See in Manteia.
RefSeq - NM_005014
RefSeq Peptide - NP_005005
swissprot - Q99983
Ensembl - ENSG00000127083
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 omdENSDARG00000093600Danio rerio
 OMDENSGALG00000026080Gallus gallus
 OmdENSMUSG00000048368Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KERA / O60938 / keratocanENSG0000013933033
PRELP / P51888 / proline and arginine rich end leucine rich repeat proteinENSG0000018878332
LUM / P51884 / lumicanENSG0000013932931
FMOD / Q06828 / fibromodulinENSG0000012217629
ECM2 / O94769 / extracellular matrix protein 2ENSG0000010682323
PODN / Q7Z5L7 / podocanENSG0000017434822
ASPN / Q9BXN1 / asporinENSG0000010681922
DCN / P07585 / decorinENSG0000001146521
BGN / P21810 / biglycanENSG0000018249221
PODNL1 / Q6PEZ8 / podocan like 1ENSG0000013200019


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR030705  Osteomodulin
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0018146 keratan sulfate biosynthetic process TAS
 biological_processGO:0030500 regulation of bone mineralization IEA
 biological_processGO:0042340 keratan sulfate catabolic process TAS
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0005796 Golgi lumen TAS
 cellular_componentGO:0031012 extracellular matrix IEA
 cellular_componentGO:0043202 lysosomal lumen TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis
Keratan sulfate degradation
Defective CHST6 causes MCDC1
Defective ST3GAL3 causes MCT12 and EIEE15
Defective B4GALT1 causes B4GALT1-CDG (CDG-2d)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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